RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 NECAP1Q8NC96 275 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 NPCDR1Q9BY65 106 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 RAB29O14966 203 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 MBP02144 154 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 GABRA2P47869 451 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 PMP22Q01453 160 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 TGFBR3Q03167 851 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 VWC2Q2TAL6 325 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 NINJ1Q92982 152 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 METRNQ9UJH8 293 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 LINC00473A8K010 186 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 GATCO43716 136 aaKnown RBP13.86□□□□□ -0.19
SPG11-215ENST00000559193 DEFA4P12838 97 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 SSTR5P35346 364 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 RTP5Q14D33 572 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 ACP7Q6ZNF0 438 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 TPRX1Q8N7U7 411 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 RAB24Q969Q5 203 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 HIST1H2BLQ99880 126 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 MANBALQ9NQG1 85 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 GAB2Q9UQC2 676 aa13.86□□□□□ -0.19
SPG11-215ENST00000559193 DIDO1Q9BTC0 2240 aaKnown RBP13.85□□□□□ -0.19
SPG11-215ENST00000559193 GZMHP20718 246 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 ARG2P78540 354 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 PRAMEF6Q5VXH4 476 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 TMPRSS7Q7RTY8 843 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 H2BFWTQ7Z2G1 175 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 OR51G1Q8NGK1 321 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 OR4F5Q8NH21 305 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 PACRGQ96M98 296 aaPredicted RBP13.85□□□□□ -0.19
SPG11-215ENST00000559193 OR4F4Q96R69 305 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 ACTR3CQ9C0K3 210 aaPredicted RBP13.85□□□□□ -0.19
SPG11-215ENST00000559193 PITPNC1Q9UKF7 332 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 GPR179Q6PRD1 2367 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 IGHV3-43A0A0B4J1X8 118 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 TNFSF15O95150 251 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 IGHV3-43DP0DP04 118 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 COX5AP20674 150 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 OR13A1Q8NGR1 328 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 ELOVL1Q9BW60 279 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 GFOD1Q9NXC2 390 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 CLCF1Q9UBD9 225 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 LAMP3Q9UQV4 416 aa13.85□□□□□ -0.19
SPG11-215ENST00000559193 H7BYZ3 331 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 GAMTQ14353 236 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 DNLZQ5SXM8 178 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 INO80CQ6PI98 192 aaPredicted RBP13.84□□□□□ -0.19
SPG11-215ENST00000559193 WDR82Q6UXN9 313 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 PRR7Q8TB68 274 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 CIB3Q96Q77 187 aaPredicted RBP13.84□□□□□ -0.19
SPG11-215ENST00000559193 TAAR6Q96RI8 345 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
SPG11-215ENST00000559193 USF3Q68DE3 2245 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 ST8SIA5O15466 376 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 AGFG2O95081 481 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 TUBG1P23258 451 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 GALR1P47211 349 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 COL10A1Q03692 680 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 Q3ZCU0 254 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 DHRS13Q6UX07 377 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 CXXC4Q9H2H0 198 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 UFSP2Q9NUQ7 469 aa13.84□□□□□ -0.19
SPG11-215ENST00000559193 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.83□□□□□ -0.19
SPG11-215ENST00000559193 PAGE4O60829 102 aa13.83□□□□□ -0.19
SPG11-215ENST00000559193 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.19
SPG11-215ENST00000559193 TMEM183AQ8IXX5 376 aa13.83□□□□□ -0.19
SPG11-215ENST00000559193 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.19
SPG11-215ENST00000559193 Q8N7P7 452 aa13.83□□□□□ -0.19
SPG11-215ENST00000559193 C15orf62A8K5M9 175 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 DEFB108AA8MXU0 73 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 ZNF66Q6ZN08 573 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 Q6ZT83 130 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 TGIF2LYQ8IUE0 185 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 ZNF709Q8N972 641 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 RFESDQ8TAC1 157 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 PSG11Q9UQ72 335 aa13.83□□□□□ -0.2
SPG11-215ENST00000559193 MARCH11A6NNE9 402 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 NDUFS6O75380 124 aaKnown RBP13.82□□□□□ -0.2
SPG11-215ENST00000559193 GYPAP02724 150 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 GNB2P62879 340 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 FAM214BQ7L5A3 538 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 TMEM178AQ8NBL3 297 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 DCTN5Q9BTE1 182 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
SPG11-215ENST00000559193 FZR1Q9UM11 496 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 CDX4O14627 284 aaPredicted RBP13.82□□□□□ -0.2
SPG11-215ENST00000559193 HRASP01112 189 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 IGKV3-15P01624 115 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 CLEC12BQ2HXU8 276 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 WDR31Q8NA23 367 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 S100PBPQ96BU1 408 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 NEIL1Q96FI4 390 aaPredicted RBP13.82□□□□□ -0.2
SPG11-215ENST00000559193 OR5B12Q96R08 314 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 PCGF1Q9BSM1 259 aa13.82□□□□□ -0.2
SPG11-215ENST00000559193 ZNF891A8MT65 544 aaPredicted RBP13.81□□□□□ -0.2
SPG11-215ENST00000559193 NPPCP23582 126 aa13.81□□□□□ -0.2
SPG11-215ENST00000559193 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
SPG11-215ENST00000559193 GUSBP1Q15486 140 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms