RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 SMAGPQ0VAQ4 97 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 PYY3Q5JQD4 70 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 SFRP2Q96HF1 295 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 SRXN1Q9BYN0 137 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 CHRNA10Q9GZZ6 450 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 ZNF576Q9H609 170 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 LDLRAD2Q5SZI1 272 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 FAM27BQ5VT28 67 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 ERASQ7Z444 233 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 VWCEQ96DN2 955 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 SLC25A33Q9BSK2 321 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 SIT1Q9Y3P8 196 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 THSD7BQ9C0I4 1608 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 C5orf63A6NC05 138 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
USP3-210ENST00000559192 C1orf185Q5T7R7 199 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 ATOH7Q8N100 152 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 SCCPDHQ8NBX0 429 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 DEFB108BQ8NET1 73 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 TAF15Q92804 592 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-210ENST00000559192 AAMDCQ9H7C9 122 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 RPRMQ9NS64 109 aa6.11□□□□□ -1.43
USP3-210ENST00000559192 CNTRLQ7Z7A1 2325 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 FRMPD3Q5JV73 1810 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 A0A087WWC5 75 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 CDIPTO14735 213 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 WISP1O95388 367 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SELEP16581 610 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 C5orf17Q8NAS9 161 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 OR4P4Q8NGL7 312 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 OR2T6Q8NHC8 308 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 MYOZ3Q8TDC0 251 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 H1FXQ92522 213 aaKnown RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 TWSG1Q9GZX9 223 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 RNF122Q9H9V4 155 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 ZNF581Q9P0T4 197 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 F11RQ9Y624 299 aaKnown RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 K7N7A8 449 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SLC25A17O43808 307 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SRFP11831 508 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 QRFPP83859 136 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 RTL8BQ17RB0 113 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 HIST3H2BBQ8N257 126 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 TEX29Q8N6K0 151 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SGK494Q96LW2 274 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 IL36RNQ9UBH0 155 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 HIST1H1BP16401 226 aaKnown RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 SRD5A2P31213 254 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 CKS1BP61024 79 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SERF2P84101 59 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 RIGQ13278 110 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SLC23A3Q6PIS1 610 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 ZNF502Q8TBZ5 544 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 ZNF837Q96EG3 531 aaPredicted RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 RCC1LQ96I51 464 aaKnown RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 P2RX4Q99571 388 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SF3B5Q9BWJ5 86 aaKnown RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 SMOC1Q9H4F8 434 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 VSIRQ9H7M9 311 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 UFC1Q9Y3C8 167 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 IGKV3D-11A0A0A0MRZ8 115 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 IGHV5-10-1A0A0J9YXX1 117 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 SMIM13P0DJ93 91 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 ZNF137PP52743 207 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 FGF12P61328 243 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 TNFRSF9Q07011 255 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 GLRX2Q9NS18 164 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 FOXD3Q9UJU5 478 aaPredicted RBP6.1□□□□□ -1.43
USP3-210ENST00000559192 KIAA1671Q9BY89 1806 aa6.1□□□□□ -1.43
USP3-210ENST00000559192 EPOPA6NHQ4 379 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 RELBQ01201 579 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 OR4X1Q8NH49 305 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 ZNF418Q8TF45 676 aaPredicted RBP6.09□□□□□ -1.43
USP3-210ENST00000559192 GUCD1Q96NT3 240 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 SPCS1Q9Y6A9 102 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 MYO9BQ13459 2157 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 KLRC4-KLRK1H3BQV0 150 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 TIAF1O95411 115 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 P01737 135 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 GPX4P36969 197 aaPredicted RBP6.09□□□□□ -1.43
USP3-210ENST00000559192 KLF3P57682 345 aaPredicted RBP6.09□□□□□ -1.43
USP3-210ENST00000559192 AMMECR1LQ6DCA0 310 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 CADM4Q8NFZ8 388 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 TMEM54Q969K7 222 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 ZNF524Q96C55 264 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 HSD17B10Q99714 261 aaKnown RBP6.09□□□□□ -1.43
USP3-210ENST00000559192 NDUFAF3Q9BU61 184 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 DYNLRB1Q9NP97 96 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 STARD6P59095 220 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 PSG5Q15238 335 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 ASCL4Q6XD76 172 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 LHFPL1Q86WI0 220 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 TPRX1Q8N7U7 411 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BLQ99880 126 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 SDF2L1Q9HCN8 221 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 ATP23Q9Y6H3 246 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 CA11O75493 328 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 IL4P05112 153 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms