RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 KBTBD11-OT1A0A1B0GTJ5 212 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 MARCH11A6NNE9 402 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 LINC00473A8K010 186 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 C9JQL5 133 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 RBMXL2O75526 392 aaKnown RBP9.37□□□□□ -0.91
CLPX-204ENST00000559152 CGB3P0DN86 165 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 CGB7P0DN87 165 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 UCNP55089 124 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 BRWD1-AS2P59051 145 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 RUNX1Q01196 453 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 LTC4SQ16873 150 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 SPRNQ5BIV9 151 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 TEX36Q5VZQ5 186 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 C22orf34Q6ZV56 151 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 RND1Q92730 232 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 CLN8Q9UBY8 286 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 TIMM9Q9Y5J7 89 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 RBFOX3A6NFN3 312 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 PPIHO43447 177 aaKnown RBP9.36□□□□□ -0.91
CLPX-204ENST00000559152 NPBWR1P48145 328 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 TMPRSS3P57727 454 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 ERVK-16P61578 105 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 RPP30P78346 268 aaKnown RBP9.36□□□□□ -0.91
CLPX-204ENST00000559152 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 FAM53AQ6NSI3 398 aaPredicted RBP9.36□□□□□ -0.91
CLPX-204ENST00000559152 DTD1Q8TEA8 209 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 R3HDM4Q96D70 268 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 S1PR3Q99500 378 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
CLPX-204ENST00000559152 EGLN1Q9GZT9 426 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 FBXO7Q9Y3I1 522 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 DPRXA6NFQ7 191 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 NKX6-3A6NJ46 265 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 ZNF729A6NN14 1252 aaPredicted RBP9.36□□□□□ -0.91
CLPX-204ENST00000559152 C17orf100A8MU93 164 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 H7C2Y5 167 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 OR4A8P0C604 315 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 ZNF788Q6ZQV5 615 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 C1orf87Q8N0U7 546 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 SFT2D1Q8WV19 159 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 CORO2AQ92828 525 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 FAM122AQ96E09 287 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 ADTRPQ96IZ2 230 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 CLCC1Q96S66 551 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 ABHD14AQ9BUJ0 271 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 SMCO4Q9NRQ5 59 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 GFOD1Q9NXC2 390 aa9.36□□□□□ -0.91
CLPX-204ENST00000559152 TRAV38-1A0A0B4J264 116 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 M0R1X1 148 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 GPR37O15354 613 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 FCGR3BO75015 233 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 CYB5R3P00387 301 aaPredicted RBP9.35□□□□□ -0.91
CLPX-204ENST00000559152 F12P00748 615 aaPredicted RBP9.35□□□□□ -0.91
CLPX-204ENST00000559152 CASP6P55212 293 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 ARL16Q0P5N6 197 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 ADIPOQQ15848 244 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 C17orf58Q2M2W7 97 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 NCR3LG1Q68D85 454 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 TMEM88Q6PEY1 159 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 GAFA1Q96PS6 74 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 VKORC1Q9BQB6 163 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 TMEM147Q9BVK8 224 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 IFI27L2Q9H2X8 130 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 LINC00574Q9H8X3 128 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 PIEZO2Q9H5I5 2752 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 HEATR1Q9H583 2144 aaKnown RBP9.35□□□□□ -0.91
CLPX-204ENST00000559152 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 CEBPZOSA8MTT3 80 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 THBDP07204 575 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 NQO2P16083 231 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 SP5Q6BEB4 398 aaPredicted RBP9.35□□□□□ -0.91
CLPX-204ENST00000559152 HAPLN4Q86UW8 402 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 OR10A7Q8NGE5 316 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 OR52E5Q8NH55 327 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLPX-204ENST00000559152 OR4C12Q96R67 309 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 SH3BGRL2Q9UJC5 107 aa9.35□□□□□ -0.91
CLPX-204ENST00000559152 NBEAQ8NFP9 2946 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 MBP02144 154 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 HSPB1P04792 205 aaKnown RBP9.34□□□□□ -0.91
CLPX-204ENST00000559152 PAX6P26367 422 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 THBS3P49746 956 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 GNB2P62879 340 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 TMEM41BQ5BJD5 291 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 SOHLH1Q5JUK2 328 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 OR8G2PQ6IF36 304 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 CENPVQ7Z7K6 275 aaPredicted RBP9.34□□□□□ -0.91
CLPX-204ENST00000559152 OR4A16Q8NH70 328 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 OR4S2Q8NH73 311 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 MBD3L1Q8WWY6 194 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 RFNGQ9Y644 331 aa9.34□□□□□ -0.91
CLPX-204ENST00000559152 A0A1B0GV50 99 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 MED19A0JLT2 244 aaPredicted RBP9.33□□□□□ -0.92
CLPX-204ENST00000559152 MEX3AA1L020 520 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms