RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CTDSPLO15194 276 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 FGF16O43320 207 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 NDUFA3O95167 84 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 IGLV2-23P01705 113 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 ZNF735P0CB33 412 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 RCVRNP35243 200 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 ARHGDIBP52566 201 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 ACTBP60709 375 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 SSBP2P81877 361 aaPredicted RBP9.05□□□□□ -0.96
SNX1-204ENST00000559061 C10orf99Q6UWK7 81 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 ZNF645Q8N7E2 425 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 GIMAP1Q8WWP7 306 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 TRIM63Q969Q1 353 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 MOB3AQ96BX8 217 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 S1PR3Q99500 378 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 ZNF747Q9BV97 191 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 TINAGL1Q9GZM7 467 aaPredicted RBP9.05□□□□□ -0.96
SNX1-204ENST00000559061 MMP27Q9H306 513 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 GHITMQ9H3K2 345 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 CCL28Q9NRJ3 127 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 EHFQ9NZC4 300 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 ZNF221Q9UK13 617 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 SRRM4A7MD48 611 aaKnown RBP9.04□□□□□ -0.96
SNX1-204ENST00000559061 GABARAPH6UMI1 98 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 GSTZ1O43708 216 aaPredicted RBP9.04□□□□□ -0.96
SNX1-204ENST00000559061 CD74P04233 296 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 CD3DP04234 171 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 LUMP51884 338 aaPredicted RBP9.04□□□□□ -0.96
SNX1-204ENST00000559061 NDPQ00604 133 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 VAX1Q5SQQ9 334 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 AADACL3Q5VUY0 350 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 PYHIN1Q6K0P9 492 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 C12orf54Q6X4T0 127 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 ZNF818PQ6ZRF7 136 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 NPBQ8NG41 125 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 OR6Q1Q8NGQ2 317 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 OR5H2Q8NGV7 314 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 SDHCQ99643 169 aaPredicted RBP9.04□□□□□ -0.96
SNX1-204ENST00000559061 CITED1Q99966 193 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 BEX1Q9HBH7 125 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 WASHC3Q9Y3C0 194 aa9.04□□□□□ -0.96
SNX1-204ENST00000559061 CRYGBP07316 175 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 GNRHRP30968 328 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 TAS2R46P59540 309 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 FXYD4P59646 89 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 IL18Q14116 193 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 TCTEX1D4Q5JR98 221 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 FAAP20Q6NZ36 180 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 KLHDC1Q8N7A1 406 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 BVESQ8NE79 360 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
SNX1-204ENST00000559061 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 LIN7CQ9NUP9 197 aaKnown RBP9.03□□□□□ -0.96
SNX1-204ENST00000559061 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 FBXO7Q9Y3I1 522 aa9.03□□□□□ -0.96
SNX1-204ENST00000559061 A0A1B0GUS0 222 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 FCN1O00602 326 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 NBR2O15453 112 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 IGHG2P01859 326 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 VSIG10L2P0DP72 767 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 ETV6P41212 452 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 THBS3P49746 956 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 PSG5Q15238 335 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 MMDQ15546 238 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 MSMO1Q15800 293 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 TMEM17Q86X19 198 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 PDPNQ86YL7 162 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 TMEM229BQ8NBD8 167 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 OR2T6Q8NHC8 308 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 FCAMRQ8WWV6 532 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 NOL4LQ96MY1 436 aaPredicted RBP9.02□□□□□ -0.97
SNX1-204ENST00000559061 SLC5A7Q9GZV3 580 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 FBXL15Q9H469 300 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 SLC35D1Q9NTN3 355 aa9.02□□□□□ -0.97
SNX1-204ENST00000559061 IGHV7-81A0A0B4J1V7 117 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 ANKRD20A5PA0PJZ0 165 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 FABP12A6NFH5 140 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
SNX1-204ENST00000559061 M0QZK8 103 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 RRHO14718 337 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 TNFSF12O43508 249 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 PEX14O75381 377 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
SNX1-204ENST00000559061 MC5RP33032 325 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 VDAC2P45880 294 aaPredicted RBP9.01□□□□□ -0.97
SNX1-204ENST00000559061 MRPS10P82664 201 aaKnown RBP9.01□□□□□ -0.97
SNX1-204ENST00000559061 CFHR3Q02985 330 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 C5orf64Q2M2E5 130 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 CNPY1Q3B7I2 92 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 TMEM177Q53S58 311 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 C19orf54Q5BKX5 351 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 OR2B11Q5JQS5 317 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 MFSD4AQ8N468 514 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 C3orf56Q8N813 242 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 OR8H1Q8NGG4 311 aa9.01□□□□□ -0.97
SNX1-204ENST00000559061 AKR1E2Q96JD6 320 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms