RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 LYRM2Q9NU23 88 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 UQCC1Q9NVA1 299 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 FSTL3O95633 263 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 HEXAP06865 529 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 SLC25A6P12236 298 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 PRDX2P32119 198 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 Q6ZRG5 221 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 SVBPQ8N300 66 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 RAB1CQ92928 201 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 TSNAXQ99598 290 aaKnown RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 TRAV39A0A0B4J263 110 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 TRAV38-1A0A0B4J264 116 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 FAM24AA6NFZ4 105 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 TSPAN4O14817 238 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 PITX3O75364 302 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 Q5PR19 223 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 CLEC2AQ6UVW9 174 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 SEC11CQ9BY50 192 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 CTSZQ9UBR2 303 aa13.08□□□□□ -0.32
CDC42BPB-204ENST00000559043 IGSF23A1L1A6 192 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 SSSCA1O60232 199 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 PSPNO60542 156 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 CD5P06127 495 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 GABRA2P47869 451 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 PUSL1Q8N0Z8 303 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 TMEM252Q8N6L7 170 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 FAM216BQ8N7L0 139 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 SLC25A31Q9H0C2 315 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 A0A1B0GU03 582 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 F8W036 122 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 RAB5CP51148 216 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 COL10A1Q03692 680 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 SLC35E4Q6ICL7 350 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 TIMD4Q96H15 378 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 TMEM231Q9H6L2 316 aa13.07□□□□□ -0.32
CDC42BPB-204ENST00000559043 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 A0A096LNT2 108 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 A0A0G2JRQ6 117 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 TMEM30CPA0ZSE6 113 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 RNASEK-C17orf49H0YIS7 233 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF737O75373 536 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 TMEM50AO95807 157 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 SERPINE2P07093 398 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 ODF3L1Q8IXM7 274 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 PRR18Q8N4B5 295 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 WFDC11Q8NEX6 87 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 OR51H1Q8NH63 302 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 LSM10Q969L4 123 aaKnown RBP13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 SDSLQ96GA7 329 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 FOXC2Q99958 501 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 CACFD1Q9UGQ2 172 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 FAM96BQ9Y3D0 163 aa13.06□□□□□ -0.32
CDC42BPB-204ENST00000559043 ARHGAP32A7KAX9 2087 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 NDUFS8O00217 210 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 HSPA12AO43301 675 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 IL2RGP31785 369 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 LMO4P61968 165 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 VAMP2P63027 116 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 BAXQ07812 192 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF266Q14584 549 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 TMEM155Q4W5P6 130 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 PRSS57Q6UWY2 283 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF841Q6ZN19 808 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 GPR146Q96CH1 333 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 SH3BGRL3Q9H299 93 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 SEBOXQ9HB31 216 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 MALRD1Q5VYJ5 2156 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 FAM74A7A6NL05 159 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 FAM157AC9JC47 383 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 NUPL2O15504 423 aaKnown RBP13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 IGKV1-39P01597 117 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 IGKV1D-39P04432 117 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 OR8U9P0C7N5 309 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 CEACAM6P40199 344 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 PAX9P55771 341 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 DSCR9P59020 149 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 FAM74A3Q4VXF1 159 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 OR8U1Q8NH10 309 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 PIMREGQ9BSJ6 248 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 TOLLIPQ9H0E2 274 aa13.05□□□□□ -0.32
CDC42BPB-204ENST00000559043 ITPR3Q14573 2671 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 OTOGQ6ZRI0 2925 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 CHST1O43916 411 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 Q96MF0 132 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 PARP12Q9H0J9 701 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms