RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 OR5C1Q8NGR4 320 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 HAVCR2Q8TDQ0 301 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 TESCQ96BS2 214 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 SLC2A9Q9NRM0 540 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 C3orf18Q9UK00 162 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 ZNF407Q9C0G0 2248 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 COL18A1P39060 1754 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 M0R381 172 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 DCTN3O75935 186 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 CD36P16671 472 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 ZNF7P17097 686 aaPredicted RBP2.06□□□□□ -2.08
CASC4-206ENST00000558847 RPL12P30050 165 aaKnown RBP2.06□□□□□ -2.08
CASC4-206ENST00000558847 CLVS2Q5SYC1 327 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 RASSF6Q6ZTQ3 369 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 LRRC34Q8IZ02 419 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 RAB8BQ92930 207 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 C12orf43Q96C57 262 aaKnown RBP2.06□□□□□ -2.08
CASC4-206ENST00000558847 TMEM109Q9BVC6 243 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 TMEM222Q9H0R3 208 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 BABAM2Q9NXR7 383 aa2.06□□□□□ -2.08
CASC4-206ENST00000558847 OR6C6A6NF89 314 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 M0R036 132 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 KRT75O95678 551 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 IGHV1-69P01742 117 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 HLA-DQB2P05538 268 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 UCHL3P15374 230 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 BLVRBP30043 206 aaPredicted RBP2.05□□□□□ -2.08
CASC4-206ENST00000558847 GNA12Q03113 381 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 JOSD1Q15040 202 aaPredicted RBP2.05□□□□□ -2.08
CASC4-206ENST00000558847 CCDC122Q5T0U0 273 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 CD200R1LQ6Q8B3 271 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 C5orf46Q6UWT4 87 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 COMMD7Q86VX2 200 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 ZNF567Q8N184 647 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 UBL4BQ8N7F7 174 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 EEF1AKMT1Q8WVE0 214 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 OPTNQ96CV9 577 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 STACQ99469 402 aa2.05□□□□□ -2.08
CASC4-206ENST00000558847 KLK5Q9Y337 293 aaPredicted RBP2.05□□□□□ -2.08
CASC4-206ENST00000558847 A0A0J9YX75 114 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 KNCNA6PVL3 124 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 ODF3BA8MYP8 253 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 C21orf140B9A014 251 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 LY6LH3BQJ8 138 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 APOMO95445 188 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 SOD1P00441 154 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 UCHL1P09936 223 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 CD24P25063 80 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 ANP32AP39687 249 aaKnown RBP2.04□□□□□ -2.08
CASC4-206ENST00000558847 GABRA4P48169 554 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 FKBP1AP62942 108 aaKnown RBP2.04□□□□□ -2.08
CASC4-206ENST00000558847 FAM229BQ4G0N7 80 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.04□□□□□ -2.08
CASC4-206ENST00000558847 HIST2H3AQ71DI3 136 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 C1orf174Q8IYL3 243 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 TMEM161BQ8NDZ6 487 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 PTH2Q96A98 100 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 MIEN1Q9BRT3 115 aa2.04□□□□□ -2.08
CASC4-206ENST00000558847 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 IGHV3-15A0A0B4J1V0 119 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 A0A1B0GV50 99 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 C19orf71A6NCJ1 209 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 OR5K4A6NMS3 321 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 OR11H12B2RN74 326 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 KCNK1O00180 336 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 TRAPPC3O43617 180 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 E2F6O75461 281 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 CRYBB3P26998 211 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 RPL27AP46776 148 aaKnown RBP2.03□□□□□ -2.08
CASC4-206ENST00000558847 CTBP2P56545 445 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 TBPL1P62380 186 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 COQ5Q5HYK3 327 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 SBSNQ6UWP8 590 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 OR11H2Q8NH07 326 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 ZCCHC13Q8WW36 166 aaKnown RBP2.03□□□□□ -2.08
CASC4-206ENST00000558847 MRPS24Q96EL2 167 aaKnown RBP2.03□□□□□ -2.08
CASC4-206ENST00000558847 DNAJC30Q96LL9 226 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 CCL13Q99616 98 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 CCL26Q9Y258 94 aa2.03□□□□□ -2.08
CASC4-206ENST00000558847 LSM5Q9Y4Y9 91 aaKnown RBP2.03□□□□□ -2.08
CASC4-206ENST00000558847 ATAD5Q96QE3 1844 aa2.03□□□□□ -2.09
CASC4-206ENST00000558847 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 C3orf84H3BNL1 204 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 NPYP01303 97 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 CALB1P05937 261 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 CCL3P10147 92 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 SLCO1A2P46721 670 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 GABRA2P47869 451 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 RBM11P57052 281 aaKnown RBP2.02□□□□□ -2.09
CASC4-206ENST00000558847 TAS2R30P59541 319 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 TAS2R20P59543 309 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 EMX1Q04741 257 aaPredicted RBP2.02□□□□□ -2.09
CASC4-206ENST00000558847 TMEM31Q5JXX7 168 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 CNEP1R1Q8N9A8 125 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 NDUFB11Q9NX14 153 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 CHD2O14647 1828 aaKnown RBP2.02□□□□□ -2.09
CASC4-206ENST00000558847 DSCAML1Q8TD84 2053 aa2.02□□□□□ -2.09
CASC4-206ENST00000558847 ADCY9O60503 1353 aa2.01□□□□□ -2.09
CASC4-206ENST00000558847 TMED7-TICAM2A0A0A6YYA0 188 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms