RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 GYPAP02724 150 aa8.82□□□□□ -1
CUX1-217ENST00000558836 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
CUX1-217ENST00000558836 OR2B8PP59922 312 aa8.82□□□□□ -1
CUX1-217ENST00000558836 BAXQ07812 192 aa8.82□□□□□ -1
CUX1-217ENST00000558836 ADAM5Q6NVV9 412 aa8.82□□□□□ -1
CUX1-217ENST00000558836 C1orf229Q6ZS94 237 aaPredicted RBP8.82□□□□□ -1
CUX1-217ENST00000558836 LURAP1Q96LR2 239 aa8.82□□□□□ -1
CUX1-217ENST00000558836 MMP24Q9Y5R2 645 aa8.82□□□□□ -1
CUX1-217ENST00000558836 ZG16O60844 167 aa8.82□□□□□ -1
CUX1-217ENST00000558836 SNRNP70P08621 437 aaKnown RBP8.82□□□□□ -1
CUX1-217ENST00000558836 GPR12P47775 334 aa8.82□□□□□ -1
CUX1-217ENST00000558836 TDGF1P3P51864 188 aa8.82□□□□□ -1
CUX1-217ENST00000558836 FGF8P55075 233 aaPredicted RBP8.82□□□□□ -1
CUX1-217ENST00000558836 EIF4EBP1Q13541 118 aaPredicted RBP8.82□□□□□ -1
CUX1-217ENST00000558836 AKR1C8PQ5T2L2 129 aa8.82□□□□□ -1
CUX1-217ENST00000558836 SPSB3Q6PJ21 355 aa8.82□□□□□ -1
CUX1-217ENST00000558836 FAM90A1Q86YD7 464 aa8.82□□□□□ -1
CUX1-217ENST00000558836 FAM216BQ8N7L0 139 aa8.82□□□□□ -1
CUX1-217ENST00000558836 CLRN3Q8NCR9 226 aa8.82□□□□□ -1
CUX1-217ENST00000558836 OR10Z1Q8NGY1 313 aa8.82□□□□□ -1
CUX1-217ENST00000558836 ZNRD1Q9P1U0 126 aa8.82□□□□□ -1
CUX1-217ENST00000558836 ANKHD1Q8IWZ3 2542 aaKnown RBP8.82□□□□□ -1
CUX1-217ENST00000558836 IGLV3-9A0A075B6K5 115 aa8.82□□□□□ -1
CUX1-217ENST00000558836 A0A1B0GWJ7 208 aa8.82□□□□□ -1
CUX1-217ENST00000558836 RNF212BA8MTL3 300 aa8.82□□□□□ -1
CUX1-217ENST00000558836 M0R036 132 aa8.82□□□□□ -1
CUX1-217ENST00000558836 ELLP55199 621 aaPredicted RBP8.82□□□□□ -1
CUX1-217ENST00000558836 TNFRSF9Q07011 255 aa8.82□□□□□ -1
CUX1-217ENST00000558836 ZNF124Q15973 351 aa8.82□□□□□ -1
CUX1-217ENST00000558836 TBR1Q16650 682 aa8.82□□□□□ -1
CUX1-217ENST00000558836 MORN2Q502X0 79 aa8.82□□□□□ -1
CUX1-217ENST00000558836 STRAPQ9Y3F4 350 aaKnown RBP8.82□□□□□ -1
CUX1-217ENST00000558836 UBE2L5PA0A1B0GUS4 154 aa8.81□□□□□ -1
CUX1-217ENST00000558836 DPRXA6NFQ7 191 aa8.81□□□□□ -1
CUX1-217ENST00000558836 C16orf97H3BN30 126 aa8.81□□□□□ -1
CUX1-217ENST00000558836 M0R1X1 148 aa8.81□□□□□ -1
CUX1-217ENST00000558836 HMGB3O15347 200 aaKnown RBP8.81□□□□□ -1
CUX1-217ENST00000558836 CLDN14O95500 239 aa8.81□□□□□ -1
CUX1-217ENST00000558836 LHBP01229 141 aa8.81□□□□□ -1
CUX1-217ENST00000558836 IFNA5P01569 189 aa8.81□□□□□ -1
CUX1-217ENST00000558836 SLC25A6P12236 298 aa8.81□□□□□ -1
CUX1-217ENST00000558836 MMP9P14780 707 aa8.81□□□□□ -1
CUX1-217ENST00000558836 RAB5CP51148 216 aa8.81□□□□□ -1
CUX1-217ENST00000558836 BSPH1Q075Z2 132 aa8.81□□□□□ -1
CUX1-217ENST00000558836 MZT1Q08AG7 82 aa8.81□□□□□ -1
CUX1-217ENST00000558836 CATR1Q13166 79 aa8.81□□□□□ -1
CUX1-217ENST00000558836 PEA15Q15121 130 aa8.81□□□□□ -1
CUX1-217ENST00000558836 H2BFWTQ7Z2G1 175 aa8.81□□□□□ -1
CUX1-217ENST00000558836 ISOC2Q96AB3 205 aa8.81□□□□□ -1
CUX1-217ENST00000558836 SNX22Q96L94 193 aa8.81□□□□□ -1
CUX1-217ENST00000558836 OR4C12Q96R67 309 aa8.81□□□□□ -1
CUX1-217ENST00000558836 RPS10P5Q9NQ39 176 aa8.81□□□□□ -1
CUX1-217ENST00000558836 DSCAML1Q8TD84 2053 aa8.81□□□□□ -1
CUX1-217ENST00000558836 RAI1Q7Z5J4 1906 aaPredicted RBP8.81□□□□□ -1
CUX1-217ENST00000558836 LRRC30A6NM36 301 aa8.81□□□□□ -1
CUX1-217ENST00000558836 MARCH11A6NNE9 402 aa8.81□□□□□ -1
CUX1-217ENST00000558836 UMAD1C9J7I0 102 aa8.81□□□□□ -1
CUX1-217ENST00000558836 MGST3O14880 152 aa8.81□□□□□ -1
CUX1-217ENST00000558836 TAS2R30P59541 319 aa8.81□□□□□ -1
CUX1-217ENST00000558836 SELENOVP59797 346 aa8.81□□□□□ -1
CUX1-217ENST00000558836 LCN15Q6UWW0 184 aa8.81□□□□□ -1
CUX1-217ENST00000558836 ZNF525Q8N782 197 aa8.81□□□□□ -1
CUX1-217ENST00000558836 RPRMQ9NS64 109 aa8.81□□□□□ -1
CUX1-217ENST00000558836 SPTAN1Q13813 2472 aaKnown RBP8.81□□□□□ -1
CUX1-217ENST00000558836 GZMHP20718 246 aa8.8□□□□□ -1
CUX1-217ENST00000558836 LOXL3P58215 753 aa8.8□□□□□ -1
CUX1-217ENST00000558836 SSX7Q7RTT5 188 aa8.8□□□□□ -1
CUX1-217ENST00000558836 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
CUX1-217ENST00000558836 SCGB1C1Q8TD33 95 aa8.8□□□□□ -1
CUX1-217ENST00000558836 PUS1Q9Y606 427 aaKnown RBP eCLIP8.8□□□□□ -1
CUX1-217ENST00000558836 AKAP6Q13023 2319 aa8.8□□□□□ -1
CUX1-217ENST00000558836 A6NJY4 79 aa8.8□□□□□ -1
CUX1-217ENST00000558836 MMP23AO75900 390 aa8.8□□□□□ -1
CUX1-217ENST00000558836 THBDP07204 575 aa8.8□□□□□ -1
CUX1-217ENST00000558836 OR4A8P0C604 315 aa8.8□□□□□ -1
CUX1-217ENST00000558836 DEFA4P12838 97 aa8.8□□□□□ -1
CUX1-217ENST00000558836 DUTP33316 252 aaKnown RBP8.8□□□□□ -1
CUX1-217ENST00000558836 GNG10P50151 68 aa8.8□□□□□ -1
CUX1-217ENST00000558836 AWAT1Q58HT5 328 aa8.8□□□□□ -1
CUX1-217ENST00000558836 RXFP4Q8TDU9 374 aa8.8□□□□□ -1
CUX1-217ENST00000558836 NEUROG1Q92886 237 aa8.8□□□□□ -1
CUX1-217ENST00000558836 GNPNAT1Q96EK6 184 aaPredicted RBP8.8□□□□□ -1
CUX1-217ENST00000558836 CLCC1Q96S66 551 aa8.8□□□□□ -1
CUX1-217ENST00000558836 RNF7Q9UBF6 113 aa8.8□□□□□ -1
CUX1-217ENST00000558836 TRAV3A0A0B4J244 114 aa8.79□□□□□ -1
CUX1-217ENST00000558836 TMPRSS2O15393 492 aa8.79□□□□□ -1
CUX1-217ENST00000558836 ADH4P08319 380 aa8.79□□□□□ -1
CUX1-217ENST00000558836 OR9G9P0C7N8 305 aa8.79□□□□□ -1
CUX1-217ENST00000558836 EIF2S3LQ2VIR3 472 aaKnown RBP8.79□□□□□ -1
CUX1-217ENST00000558836 TMEM108Q6UXF1 575 aa8.79□□□□□ -1
CUX1-217ENST00000558836 C1orf174Q8IYL3 243 aa8.79□□□□□ -1
CUX1-217ENST00000558836 ZFP82Q8N141 532 aa8.79□□□□□ -1
CUX1-217ENST00000558836 ZBTB34Q8NCN2 500 aa8.79□□□□□ -1
CUX1-217ENST00000558836 QTRT1Q9BXR0 403 aaKnown RBP8.79□□□□□ -1
CUX1-217ENST00000558836 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.79□□□□□ -1
CUX1-217ENST00000558836 CALYQ9NYX4 217 aa8.79□□□□□ -1
CUX1-217ENST00000558836 TET2Q6N021 2002 aaPredicted RBP8.79□□□□□ -1
CUX1-217ENST00000558836 RBFOX3A6NFN3 312 aa8.79□□□□□ -1
CUX1-217ENST00000558836 CEBPZOSA8MTT3 80 aa8.79□□□□□ -1
CUX1-217ENST00000558836 DFFBO76075 338 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms