RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 LGALS9BQ3B8N2 356 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 TMEM30BQ3MIR4 351 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 NHLRC3Q5JS37 347 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 C6orf183Q5T699 404 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 C19orf35Q6ZS72 473 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 Q6ZTC4 211 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 SYS1Q8N2H4 156 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 PACRGLQ8N7B6 248 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 OR2AK2Q8NG84 335 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 OR11H2Q8NH07 326 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 MYCBPQ99417 103 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-206ENST00000558739 GPER1Q99527 375 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 MAP6D1Q9H9H5 199 aa8.66□□□□□ -1.02
SMAD3-206ENST00000558739 FGF20Q9NP95 211 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-206ENST00000558739 RPL36Q9Y3U8 105 aaKnown RBP8.66□□□□□ -1.02
SMAD3-206ENST00000558739 CASQ2O14958 399 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-206ENST00000558739 MAS1P04201 325 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 HTR1AP08908 422 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 LGALS7P47929 136 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 TNP2Q05952 138 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 ASCL4Q6XD76 172 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 LHFPL3Q86UP9 236 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 GAPTQ8N292 157 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 OR5B3Q8NH48 314 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 ABHD14BQ96IU4 210 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 C4orf36Q96KX1 117 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 ALG8Q9BVK2 526 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 ISG20L2Q9H9L3 353 aaKnown RBP8.65□□□□□ -1.02
SMAD3-206ENST00000558739 AMBNQ9NP70 447 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 ERVK13-1Q9NX77 482 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 JPT1Q9UK76 154 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 S4R3C0 116 aa8.65□□□□□ -1.02
SMAD3-206ENST00000558739 J3QLW9 94 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 RBBP9O75884 186 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 IGLV2-23P01705 113 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 LIMS3P0CW19 117 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 LIMS4P0CW20 117 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
SMAD3-206ENST00000558739 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF19P17023 458 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 HLA-DMBP28068 263 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 MRPL28Q13084 256 aaKnown RBP8.64□□□□□ -1.03
SMAD3-206ENST00000558739 RCN1Q15293 331 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 SMN1Q16637 294 aaKnown RBP8.64□□□□□ -1.03
SMAD3-206ENST00000558739 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 OGFRL1Q5TC84 451 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-206ENST00000558739 TTC23Q5W5X9 447 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 STX19Q8N4C7 294 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF555Q8NEP9 628 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 OR52I1Q8NGK6 324 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 THRSPQ92748 146 aa8.64□□□□□ -1.03
SMAD3-206ENST00000558739 MRPL48Q96GC5 212 aaKnown RBP8.64□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF320A2RRD8 509 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 A8MWP6 167 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 LGALS9O00182 355 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 PROP1O75360 226 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 SPDEFO95238 335 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 RPSAP08865 295 aaKnown RBP8.63□□□□□ -1.03
SMAD3-206ENST00000558739 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 CPEP16870 476 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 DCKP27707 260 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
SMAD3-206ENST00000558739 ATP5G2Q06055 141 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 PVRIGQ6DKI7 326 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 APRG1Q8IVJ8 170 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 SERPINA12Q8IW75 414 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
SMAD3-206ENST00000558739 TRBV9A0A0B4J1U6 114 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 FAM223BA6NKX1 122 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 TMEM212A6NML5 194 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 C11orf94C9JXX5 98 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 E9PI62 339 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 YPEL1O60688 119 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 CRYGBP07316 175 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 MPV17LQ2QL34 196 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 SLC22A6Q4U2R8 563 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 C6orf141Q5SZD1 244 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 RAB12Q6IQ22 244 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 FAM71F2Q6NXP2 309 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF529Q6P280 563 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 Q6ZRM9 215 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 FAM223AQ8IWN6 122 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 DHRSXQ8N5I4 330 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 PARP16Q8N5Y8 322 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 ZNF383Q8NA42 475 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 MRPL30Q8TCC3 161 aaKnown RBP8.62□□□□□ -1.03
SMAD3-206ENST00000558739 CCDC140Q96MF4 163 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 YPEL2Q96QA6 119 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 TSNAXQ99598 290 aaKnown RBP8.62□□□□□ -1.03
SMAD3-206ENST00000558739 CHRDL1Q9BU40 450 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 TAS2R4Q9NYW5 299 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 IL36GQ9NZH8 169 aa8.62□□□□□ -1.03
SMAD3-206ENST00000558739 UBE2QL1A1L167 161 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 ANKRD65E5RJM6 399 aa8.61□□□□□ -1.03
SMAD3-206ENST00000558739 RAB29O14966 203 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms