RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 FAM180AQ6UWF9 173 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 ZNF826PQ6ZT77 177 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 SEM1Q6ZVN7 128 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 C5orf24Q7Z6I8 188 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 C1QL4Q86Z23 238 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 CD177Q8N6Q3 437 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 OR10A7Q8NGE5 316 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 OR52L2PQ8NGH6 319 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 MRGPRDQ8TDS7 321 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 RXFP4Q8TDU9 374 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 TAF15Q92804 592 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG11-209ENST00000558253 S100PBPQ96BU1 408 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 C14orf79Q96F83 325 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 SDSLQ96GA7 329 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 MEGF10Q96KG7 1140 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 NIPSNAP3BQ9BS92 247 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 PARP12Q9H0J9 701 aaKnown RBP6.94□□□□□ -1.3
SPG11-209ENST00000558253 LINC00574Q9H8X3 128 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 MSL2Q9HCI7 577 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 KCNIP2Q9NS61 270 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 MIOXQ9UGB7 285 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 VAX2Q9UIW0 290 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 RTTNQ86VV8 2226 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 TRAV39A0A0B4J263 110 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 PCNX2A6NKB5 2137 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 M0R1B8 84 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 PRRG2O14669 202 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 WNT9BO14905 357 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 SIGLEC5O15389 551 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 C1QL1O75973 258 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 WISP2O76076 250 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 KRASP01116 189 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 IFNA17P01571 189 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 METTL15P1P0C7V9 234 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 BTF3P20290 206 aaKnown RBP6.93□□□□□ -1.3
SPG11-209ENST00000558253 AGAP20933 346 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 PPP1CCP36873 323 aaKnown RBP6.93□□□□□ -1.3
SPG11-209ENST00000558253 GLIPR1P48060 266 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 ASCL1P50553 236 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 SPCS3P61009 180 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 SRSF6Q13247 344 aaKnown RBP6.93□□□□□ -1.3
SPG11-209ENST00000558253 ICAM4Q14773 271 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 MORN2Q502X0 79 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 PRAMEF6Q5VXH4 476 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 ZNF474Q6S9Z5 364 aaPredicted RBP6.93□□□□□ -1.3
SPG11-209ENST00000558253 DTD1Q8TEA8 209 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 CORO2AQ92828 525 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 TVP23CQ96ET8 276 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 OR4C12Q96R67 309 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 GPHA2Q96T91 129 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 AGMATQ9BSE5 352 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 RNF7Q9UBF6 113 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 GNG12Q9UBI6 72 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 DUSP13Q9UII6 198 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 FAM215AQ9Y5M1 114 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 SHANK1Q9Y566 2161 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 WDR87Q6ZQQ6 2873 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 AHCTF1Q8WYP5 2266 aa6.93□□□□□ -1.3
SPG11-209ENST00000558253 KNTC1P50748 2209 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 IGKV1D-17A0A075B6S4 117 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 TRGV10A0A0A0MS01 117 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 A8MXE2 369 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 H3BQ15 152 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 AP4M1O00189 453 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 CYB5BO43169 146 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 CD55P08174 381 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 SNRNP70P08621 437 aaKnown RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 OR13C7P0DN81 318 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 CGB3P0DN86 165 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 CGB7P0DN87 165 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 BCL2P10415 239 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 IAPPP10997 89 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 IRF2P14316 349 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 TNFRSF1AP19438 455 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 RAB4AP20338 218 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 RAB5AP20339 215 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 NFYBP25208 207 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 DUTP33316 252 aaKnown RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 G6PCP35575 357 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 THBS3P49746 956 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 ZNF83P51522 516 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 TMPRSS3P57727 454 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 SNRPEP62304 92 aaKnown RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 RELQ04864 619 aaPredicted RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 TMEM267Q0VDI3 215 aaPredicted RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 HABP2Q14520 560 aaPredicted RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 ZNF124Q15973 351 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 TMEM108Q6UXF1 575 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 ZNF429Q86V71 674 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 RBMXL3Q8N7X1 1067 aaKnown RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 OR13A1Q8NGR1 328 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 OR4S2Q8NH73 311 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 HIST1H2BAQ96A08 127 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 OR2V2Q96R30 315 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 S1PR3Q99500 378 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 ACTR3CQ9C0K3 210 aaPredicted RBP6.92□□□□□ -1.3
SPG11-209ENST00000558253 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms