RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 AMY1AP04745 511 aa6□□□□□ -1.45
SPG11-205ENST00000558080 AMY2AP04746 511 aa6□□□□□ -1.45
SPG11-205ENST00000558080 SNRNP70P08621 437 aaKnown RBP6□□□□□ -1.45
SPG11-205ENST00000558080 GNB3P16520 340 aa6□□□□□ -1.45
SPG11-205ENST00000558080 SSTR5P35346 364 aa6□□□□□ -1.45
SPG11-205ENST00000558080 KCNJ3P48549 501 aa6□□□□□ -1.45
SPG11-205ENST00000558080 CCR6P51684 374 aa6□□□□□ -1.45
SPG11-205ENST00000558080 RAB25P57735 213 aa6□□□□□ -1.45
SPG11-205ENST00000558080 HES1Q14469 280 aa6□□□□□ -1.45
SPG11-205ENST00000558080 HNF4GQ14541 408 aa6□□□□□ -1.45
SPG11-205ENST00000558080 MEF2DQ14814 521 aa6□□□□□ -1.45
SPG11-205ENST00000558080 BEAN1Q3B7T3 259 aa6□□□□□ -1.45
SPG11-205ENST00000558080 ACTBL2Q562R1 376 aa6□□□□□ -1.45
SPG11-205ENST00000558080 NHLRC3Q5JS37 347 aa6□□□□□ -1.45
SPG11-205ENST00000558080 FAM53AQ6NSI3 398 aaPredicted RBP6□□□□□ -1.45
SPG11-205ENST00000558080 CCDC144NLQ6NUI1 221 aa6□□□□□ -1.45
SPG11-205ENST00000558080 STEAP1BQ6NZ63 245 aa6□□□□□ -1.45
SPG11-205ENST00000558080 C10orf99Q6UWK7 81 aa6□□□□□ -1.45
SPG11-205ENST00000558080 DRAM1Q8N682 238 aa6□□□□□ -1.45
SPG11-205ENST00000558080 OR4C16Q8NGL9 310 aa6□□□□□ -1.45
SPG11-205ENST00000558080 NICN1Q9BSH3 213 aa6□□□□□ -1.45
SPG11-205ENST00000558080 C20orf85Q9H1P6 137 aa6□□□□□ -1.45
SPG11-205ENST00000558080 LINC00574Q9H8X3 128 aa6□□□□□ -1.45
SPG11-205ENST00000558080 NUDT15Q9NV35 164 aa6□□□□□ -1.45
SPG11-205ENST00000558080 PRR13Q9NZ81 148 aa6□□□□□ -1.45
SPG11-205ENST00000558080 ANAPC10Q9UM13 185 aa6□□□□□ -1.45
SPG11-205ENST00000558080 AMMECR1Q9Y4X0 333 aaPredicted RBP6□□□□□ -1.45
SPG11-205ENST00000558080 SORL1Q92673 2214 aa6□□□□□ -1.45
SPG11-205ENST00000558080 PRKDCP78527 4128 aaKnown RBP6□□□□□ -1.45
SPG11-205ENST00000558080 TRAV6A0A075B6T7 132 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 IGHV3-43A0A0B4J1X8 118 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 A0A0B4J293 547 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 TCRBV4S1A1TA0A5B7 111 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 TMEM30CPA0ZSE6 113 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 C7orf66A4D0T2 115 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 MEIS3P1A6NDR6 274 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A10PA6NDY2 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A18PA6NE21 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A16PA6NEW6 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A20PA6NIJ5 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A7PA6NKC0 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FOXI3A8MTJ6 420 aaPredicted RBP5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A12PA8MX19 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A5PA8MXJ8 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A23PA8MXZ1 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 DISC1C4P0D8 188 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 BOLA2-SMG1P6H3BVE0 249 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 SDCBPO00560 298 aaPredicted RBP5.99□□□□□ -1.45
SPG11-205ENST00000558080 SOCS1O15524 211 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 CCNKO75909 580 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 CD74P04233 296 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 CD3DP04234 171 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A15PP0C7V4 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A13PP0C7W8 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A14PP0C7W9 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A24PP0C7X0 464 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 FAM106CPP0CH98 169 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 IGHV3-43DP0DP04 118 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 GZMHP20718 246 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 BLVRBP30043 206 aaPredicted RBP5.99□□□□□ -1.45
SPG11-205ENST00000558080 CD83Q01151 205 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 PAX5Q02548 391 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 ARFRP1Q13795 201 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 RBMS2Q15434 407 aaKnown RBP5.99□□□□□ -1.45
SPG11-205ENST00000558080 RNASE10Q5GAN6 216 aaKnown RBP5.99□□□□□ -1.45
SPG11-205ENST00000558080 TCTEX1D4Q5JR98 221 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 PLAC9Q5JTB6 97 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 OR4F17Q8NGA8 305 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 OR10A7Q8NGE5 316 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 OR10X1Q8NGY0 326 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 NUDCD2Q8WVJ2 157 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 ARL11Q969Q4 196 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 ARHGAP5-AS1Q96IT6 56 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 CYYR1Q96J86 154 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 OR4F4Q96R69 305 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 PECRQ9BY49 303 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 IFT22Q9H7X7 185 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 SCP2D1Q9UJQ7 156 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 ZNF221Q9UK13 617 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 HSF4Q9ULV5 492 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 MOB4Q9Y3A3 225 aa5.99□□□□□ -1.45
SPG11-205ENST00000558080 IGHV3-72A0A0B4J1Y9 119 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 A0A1W2PPI3 338 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 UBE2QL1A1L167 161 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 FAM90A9PA6NNJ1 464 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 MCRIP1C9JLW8 97 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 C15orf65H3BRN8 121 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 SSX5O60225 188 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 IGKV1D-33P01593 117 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 IGKV1-33P01594 117 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 IL5P05113 134 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 TMEM11P17152 192 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 NAT1P18440 290 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 REG1BP48304 166 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 RAB7AP51149 207 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 MECP2P51608 486 aaKnown RBP5.98□□□□□ -1.45
SPG11-205ENST00000558080 TMEM50BP56557 158 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 RRAS2P62070 204 aaPredicted RBP5.98□□□□□ -1.45
SPG11-205ENST00000558080 MRPS15P82914 257 aaKnown RBP5.98□□□□□ -1.45
SPG11-205ENST00000558080 MPV17LQ2QL34 196 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms