RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 C9orf152Q5JTZ5 239 aa10.78□□□□□ -0.68
LDLR-207ENST00000558013 FAM209BQ5JX69 171 aa10.78□□□□□ -0.68
LDLR-207ENST00000558013 SSX9Q7RTT3 188 aa10.78□□□□□ -0.68
LDLR-207ENST00000558013 VKORC1L1Q8N0U8 176 aa10.78□□□□□ -0.68
LDLR-207ENST00000558013 GMPPAQ96IJ6 420 aaPredicted RBP10.78□□□□□ -0.68
LDLR-207ENST00000558013 PSMG3Q9BT73 122 aaPredicted RBP10.78□□□□□ -0.68
LDLR-207ENST00000558013 PSG11Q9UQ72 335 aa10.78□□□□□ -0.68
LDLR-207ENST00000558013 TNFSF10P50591 281 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 COL10A1Q03692 680 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 Q3ZCU0 254 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 WDR82Q6UXN9 313 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 AURKAIP1Q9NWT8 199 aaPredicted RBP10.77□□□□□ -0.69
LDLR-207ENST00000558013 HSPB7Q9UBY9 170 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 VAX2Q9UIW0 290 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 PLCE1Q9P212 2302 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.69
LDLR-207ENST00000558013 EGR1P18146 543 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 SERF2P84101 59 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 TGFBR3Q03167 851 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 SPRNQ5BIV9 151 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 FAM214BQ7L5A3 538 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 FDCSPQ8NFU4 85 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 SMIM7Q9BQ49 75 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 HES4Q9HCC6 221 aa10.77□□□□□ -0.69
LDLR-207ENST00000558013 TACC2O95359 2948 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 PROP1O75360 226 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 P0C879 139 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 WT1P19544 449 aaPredicted RBP10.76□□□□□ -0.69
LDLR-207ENST00000558013 EIF4EBP1Q13541 118 aaPredicted RBP10.76□□□□□ -0.69
LDLR-207ENST00000558013 ACP7Q6ZNF0 438 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 WDR31Q8NA23 367 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 C9orf106Q8NAJ2 232 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 SNX22Q96L94 193 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 TCEAL7Q9BRU2 100 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 ELOVL1Q9BW60 279 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 SIRT7Q9NRC8 400 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 PMS2P5A8MQ11 134 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 WNT2P09544 360 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 FGF7P21781 194 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 KIR2DL2P43627 348 aaPredicted RBP10.76□□□□□ -0.69
LDLR-207ENST00000558013 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 MRGPRGQ86SM5 289 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
LDLR-207ENST00000558013 OTOGLQ3ZCN5 2332 aa10.76□□□□□ -0.69
LDLR-207ENST00000558013 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 CLDN34H7C241 214 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 TIMM8AO60220 97 aaPredicted RBP10.75□□□□□ -0.69
LDLR-207ENST00000558013 CYB5R3P00387 301 aaPredicted RBP10.75□□□□□ -0.69
LDLR-207ENST00000558013 CECR9P0C854 216 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 NCR3LG1Q68D85 454 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 CD177Q8N6Q3 437 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 OR10G4Q8NGN3 311 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 GAR1Q9NY12 217 aaKnown RBP10.75□□□□□ -0.69
LDLR-207ENST00000558013 CLCF1Q9UBD9 225 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 TUBG1P23258 451 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 MEF2BQ02080 365 aaPredicted RBP10.75□□□□□ -0.69
LDLR-207ENST00000558013 MSMPQ1L6U9 139 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 FFAR4Q5NUL3 377 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 Q6ZT83 130 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 OR10G9Q8NGN4 311 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 OR10G7Q8NGN6 311 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 NINJ1Q92982 152 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 FABP4P15090 132 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 PRSS8Q16651 343 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 LRP11Q86VZ4 500 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 OR51G1Q8NGK1 321 aa10.75□□□□□ -0.69
LDLR-207ENST00000558013 QTRT1Q9BXR0 403 aaKnown RBP10.75□□□□□ -0.69
LDLR-207ENST00000558013 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.75□□□□□ -0.69
LDLR-207ENST00000558013 IGHV3OR15-7A0A075B7D8 119 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 OOEPA6NGQ2 149 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 GZMHP20718 246 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 FIP1L1Q6UN15 594 aaKnown RBP10.74□□□□□ -0.69
LDLR-207ENST00000558013 H2BFWTQ7Z2G1 175 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 C1orf87Q8N0U7 546 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 ZNF383Q8NA42 475 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 OR4F5Q8NH21 305 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 LEAP2Q969E1 77 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 RAB24Q969Q5 203 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 OR4F4Q96R69 305 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 AGMATQ9BSE5 352 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 PHOX2AO14813 284 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 SOX15O60248 233 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 PAGE4O60829 102 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 S100PP25815 95 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 NKX6-1P78426 367 aaPredicted RBP10.74□□□□□ -0.69
LDLR-207ENST00000558013 C16orf82Q7Z2V1 217 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 TMEM178AQ8NBL3 297 aa10.74□□□□□ -0.69
LDLR-207ENST00000558013 OPN3Q9H1Y3 402 aaPredicted RBP10.74□□□□□ -0.69
LDLR-207ENST00000558013 TRAV38-1A0A0B4J264 116 aa10.73□□□□□ -0.69
LDLR-207ENST00000558013 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
LDLR-207ENST00000558013 M0R296 226 aa10.73□□□□□ -0.69
LDLR-207ENST00000558013 LY86O95711 162 aa10.73□□□□□ -0.69
LDLR-207ENST00000558013 CRYAAP02489 173 aa10.73□□□□□ -0.69
LDLR-207ENST00000558013 S100A2P29034 98 aa10.73□□□□□ -0.69
LDLR-207ENST00000558013 FAM201AQ5SY85 155 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms