RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 RITA1Q96K30 269 aa12.24□□□□□ -0.45
NEDD1-213ENST00000557644 VPREB3Q9UKI3 123 aa12.24□□□□□ -0.45
NEDD1-213ENST00000557644 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
NEDD1-213ENST00000557644 BTBD17A6NE02 478 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 IGKV1-16P04430 117 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 CD1BP29016 333 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 UCP3P55916 312 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 OR2B11Q5JQS5 317 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 BVESQ8NE79 360 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 OR5R1Q8NH85 324 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 TAF15Q92804 592 aaKnown RBP eCLIP12.23□□□□□ -0.45
NEDD1-213ENST00000557644 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 ATRQ13535 2644 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 A6NDX4 124 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 CHST1O43916 411 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 IFNA2P01563 188 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 CCR6P51684 374 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 UBA52P62987 128 aaKnown RBP12.23□□□□□ -0.45
NEDD1-213ENST00000557644 DEDD2Q8WXF8 326 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 DDB2Q92466 427 aa12.23□□□□□ -0.45
NEDD1-213ENST00000557644 EAF1Q96JC9 268 aaPredicted RBP12.23□□□□□ -0.45
NEDD1-213ENST00000557644 H7C2Y5 167 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 GPR31O00270 319 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 BTCP35070 178 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 SLC38A6Q8IZM9 456 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 TMEM86BQ8N661 226 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 AKR1E2Q96JD6 320 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 TBC1D24Q9ULP9 559 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 CLDN34H7C241 214 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 PGLYRP1O75594 196 aaPredicted RBP12.22□□□□□ -0.45
NEDD1-213ENST00000557644 RLN1P04808 185 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 THBS3P49746 956 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 BRWD1-AS2P59051 145 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 MSMO1Q15800 293 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 THNSL2Q86YJ6 484 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 ZBTB34Q8NCN2 500 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 TCTEX1D2Q8WW35 142 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 JMJD8Q96S16 334 aa12.22□□□□□ -0.45
NEDD1-213ENST00000557644 HSD17B10Q99714 261 aaKnown RBP12.22□□□□□ -0.45
NEDD1-213ENST00000557644 A0A0A6YYJ9 748 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 PEX14O75381 377 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 TMEM11P17152 192 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 EBI3Q14213 229 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 LPCAT3Q6P1A2 487 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 CMTM1Q8IZ96 169 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 SLC2A9Q9NRM0 540 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 SLC35D1Q9NTN3 355 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 VSIG4Q9Y279 399 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 WASHC3Q9Y3C0 194 aa12.21□□□□□ -0.45
NEDD1-213ENST00000557644 LYRM1O43325 122 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 GPR137BO60478 399 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 MOSP00540 346 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 CNTFRP26992 372 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 C16orf87Q6PH81 154 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 ZNF66Q6ZN08 573 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 OR2T10Q8NGZ9 312 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 RTBDNQ9BSG5 229 aaPredicted RBP12.21□□□□□ -0.46
NEDD1-213ENST00000557644 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.46
NEDD1-213ENST00000557644 FBN1P35555 2871 aaKnown RBP12.2□□□□□ -0.46
NEDD1-213ENST00000557644 FAM181BA6NEQ2 426 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 CENPXA8MT69 81 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 FCGR3BO75015 233 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 APOA2P02652 100 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 RNASE1P07998 156 aaKnown RBP12.2□□□□□ -0.46
NEDD1-213ENST00000557644 MC5RP33032 325 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 F2RL1P55085 397 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 PIGPP57054 158 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 Q8N6K4 173 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 ADTRPQ96IZ2 230 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 SLC25A33Q9BSK2 321 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 PITPNC1Q9UKF7 332 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 GPR132Q9UNW8 380 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 NAP1L6A6NFF2 107 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 RAMP3O60896 148 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 BORCS5Q969J3 196 aa12.2□□□□□ -0.46
NEDD1-213ENST00000557644 RBM14Q96PK6 669 aaKnown RBP12.2□□□□□ -0.46
NEDD1-213ENST00000557644 CRYZL1O95825 349 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 PDPNQ86YL7 162 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 ZFAND1Q8TCF1 268 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 C7orf50Q9BRJ6 194 aaKnown RBP12.19□□□□□ -0.46
NEDD1-213ENST00000557644 OR2F2O95006 317 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 CTSDP07339 412 aaPredicted RBP12.19□□□□□ -0.46
NEDD1-213ENST00000557644 ECI1P42126 302 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 SURF2Q15527 256 aaPredicted RBP12.19□□□□□ -0.46
NEDD1-213ENST00000557644 ADAD2Q8NCV1 583 aaKnown RBP12.19□□□□□ -0.46
NEDD1-213ENST00000557644 ZNF486Q96H40 463 aaPredicted RBP12.19□□□□□ -0.46
NEDD1-213ENST00000557644 PLSCR3Q9NRY6 295 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 PRELID3BQ9Y3B1 194 aa12.19□□□□□ -0.46
NEDD1-213ENST00000557644 SH2D7A6NKC9 451 aaPredicted RBP12.18□□□□□ -0.46
NEDD1-213ENST00000557644 NCBP2LA6PVI3 153 aaKnown RBP12.18□□□□□ -0.46
NEDD1-213ENST00000557644 MMDQ15546 238 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms