RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TRBV6-7A0A0A0MS04 114 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-230ENST00000557427 A0A1W2PRD5 423 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 A0A1W2PRF3 423 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 A0A1W2PRM7 423 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 FAM25EA8MYX2 175 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 OR2F2O95006 317 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 NXPH2O95156 264 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 DIRAS3O95661 229 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 PPYP01298 95 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 ZNF44P15621 663 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 AADACP22760 399 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 PSMB6P28072 239 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 DUSP1P28562 367 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 PRDX2P32119 198 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 DLX1P56177 255 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 PIGPP57054 158 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 OR2F1Q13607 317 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
SHMT2-230ENST00000557427 ABCA11PQ4W5N1 156 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 ACP7Q6ZNF0 438 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 MOB1BQ7L9L4 216 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 FAM185AQ8N0U4 392 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 GAPTQ8N292 157 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 KCNRGQ8N5I3 272 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 C11orf44Q8N8P7 122 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 OR4A4PQ8NGN8 299 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 THAP6Q8TBB0 222 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 TOMM40LQ969M1 308 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 DNTTIP1Q9H147 329 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 NAA60Q9H7X0 242 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 OR14J1Q9UGF5 321 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
SHMT2-230ENST00000557427 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 SLC33A1O00400 549 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-230ENST00000557427 SH2D1BO14796 132 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 SIGLEC5O15389 551 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 TUSC2O75896 110 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 OR2H2O95918 312 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 IGHV1-69P01742 117 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 TK1P04183 234 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 LYL1P12980 280 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 CEBPDP49716 269 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-230ENST00000557427 FXYD4P59646 89 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 RND3P61587 244 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 IL15RAQ13261 267 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 IGSF11Q5DX21 431 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 ACOT7LQ6ZUV0 252 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 LRTM2Q8N967 370 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 CFHR4Q92496 578 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 ARL6Q9H0F7 186 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 METTL8Q9H825 291 aaKnown RBP10.12□□□□□ -0.79
SHMT2-230ENST00000557427 RDH8Q9NYR8 311 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 GLS2Q9UI32 602 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 KPTNQ9Y664 436 aa10.12□□□□□ -0.79
SHMT2-230ENST00000557427 A0A0U1RQK1 487 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 NPIPB11E5RHQ5 1161 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 ADAP1O75689 374 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 CFDP00746 253 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-230ENST00000557427 SCTP09683 121 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 LMO1P25800 156 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 KCNJ3P48549 501 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 TMEM187Q14656 261 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 SMIM21Q3B7S5 101 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 PAN3Q58A45 887 aaKnown RBP10.11□□□□□ -0.79
SHMT2-230ENST00000557427 CLLU1Q5K131 121 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 LDLRAD3Q86YD5 345 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 Q8N7P7 452 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 RTN4IP1Q8WWV3 396 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-230ENST00000557427 SDSLQ96GA7 329 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 SLC2A9Q9NRM0 540 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 GAR1Q9NY12 217 aaKnown RBP10.11□□□□□ -0.79
SHMT2-230ENST00000557427 SIGLEC9Q9Y336 463 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
SHMT2-230ENST00000557427 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 WI2-2373I1.2A0A1W2PRP0 233 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 HSPB6O14558 160 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 IFNA21P01568 189 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 SRPXP78539 464 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 KLRD1Q13241 179 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 LRRC37A5PQ49AS3 106 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 SLC35E4Q6ICL7 350 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 SLC51BQ86UW2 128 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 LYG1Q8N1E2 194 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 PNKDQ8N490 385 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
SHMT2-230ENST00000557427 OR10C1Q96KK4 312 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms