RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 FAM103A1Q9BTL3 118 aaKnown RBP12.92□□□□□ -0.34
VSX1-207ENST00000557285 TPSG1Q9NRR2 321 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 SDHAF2Q9NX18 166 aa12.92□□□□□ -0.34
VSX1-207ENST00000557285 SLC25A17O43808 307 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 CA2P00918 260 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
VSX1-207ENST00000557285 GNG2P59768 71 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 GNB1P62873 340 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 HACD4Q5VWC8 232 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 PDPNQ86YL7 162 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 OR5H6Q8NGV6 325 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 C4orf3Q8WVX3 66 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 FLYWCH2Q96CP2 140 aaKnown RBP12.91□□□□□ -0.34
VSX1-207ENST00000557285 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 TSNAXQ99598 290 aaKnown RBP12.91□□□□□ -0.34
VSX1-207ENST00000557285 GNB4Q9HAV0 340 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
VSX1-207ENST00000557285 WI2-2373I1.2A0A1W2PRP0 233 aa12.9□□□□□ -0.34
VSX1-207ENST00000557285 DTYMKP23919 212 aa12.9□□□□□ -0.34
VSX1-207ENST00000557285 TGFBR1P36897 503 aa12.9□□□□□ -0.34
VSX1-207ENST00000557285 ARL6IP1Q15041 203 aa12.9□□□□□ -0.34
VSX1-207ENST00000557285 ZNF660Q6AZW8 331 aaPredicted RBP12.9□□□□□ -0.34
VSX1-207ENST00000557285 PPP1R27Q86WC6 154 aa12.9□□□□□ -0.34
VSX1-207ENST00000557285 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.9□□□□□ -0.34
VSX1-207ENST00000557285 ZNF580Q9UK33 172 aa12.9□□□□□ -0.34
VSX1-207ENST00000557285 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 NFYAP23511 347 aaPredicted RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 RAB9AP51151 201 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 LUMP51884 338 aaPredicted RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 LSM3P62310 102 aaKnown RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 CBX3Q13185 183 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 DEFB121Q5J5C9 76 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 UNQ5815/PRO19632Q6UWF5 114 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 H1FOOQ8IZA3 346 aaPredicted RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 BVESQ8NE79 360 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 OR11H1Q8NG94 326 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 OR5M8Q8NGP6 311 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 HARBI1Q96MB7 349 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 MCRIP2Q9BUT9 160 aaKnown RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 TOLLIPQ9H0E2 274 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
VSX1-207ENST00000557285 VSIG4Q9Y279 399 aa12.89□□□□□ -0.35
VSX1-207ENST00000557285 K7EIL1 84 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 SOX15O60248 233 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 CNIH1O95406 144 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 FCER2P06734 321 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 EGR2P11161 476 aaPredicted RBP12.88□□□□□ -0.35
VSX1-207ENST00000557285 ZNF260Q3ZCT1 412 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 ZNF491Q8N8L2 437 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 MINDY2Q8NBR6 621 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 LFNGQ8NES3 379 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 SLC25A38Q96DW6 304 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 MS4A10Q96PG2 267 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 RNF5Q99942 180 aa12.88□□□□□ -0.35
VSX1-207ENST00000557285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
VSX1-207ENST00000557285 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 SHOXO15266 292 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 SSX5O60225 188 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 SCGNO76038 276 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 SPDEFO95238 335 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 DIRAS3O95661 229 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
VSX1-207ENST00000557285 PJVKQ0ZLH3 352 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 KIAA0141Q14154 515 aaPredicted RBP12.87□□□□□ -0.35
VSX1-207ENST00000557285 FXYD3Q14802 87 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 SRSF7Q16629 238 aaKnown RBP eCLIP12.87□□□□□ -0.35
VSX1-207ENST00000557285 RTL8BQ17RB0 113 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 OR2B11Q5JQS5 317 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 Q6ZS49 121 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 TSPAN14Q8NG11 270 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 OR1N2Q8NGR9 330 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 MYOZ3Q8TDC0 251 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 UBE2E2Q96LR5 201 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 VCX3AQ9NNX9 186 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 ZNF355PQ9NSJ1 428 aa12.87□□□□□ -0.35
VSX1-207ENST00000557285 SEC14L6B5MCN3 397 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 ARPC1BO15143 372 aaKnown RBP12.86□□□□□ -0.35
VSX1-207ENST00000557285 AIREO43918 545 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 CRYZL1O95825 349 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 PITPNAQ00169 270 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 ZNF562Q6V9R5 426 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 ETV7Q9Y603 341 aa12.86□□□□□ -0.35
VSX1-207ENST00000557285 A0A087WXM4 84 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 I3L521 148 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 TUSC2O75896 110 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 IGLV2-23P01705 113 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 PTHLHP12272 177 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 CRIP2P52943 208 aaPredicted RBP12.85□□□□□ -0.35
VSX1-207ENST00000557285 TPPP2P59282 170 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 ARPC4P59998 168 aa12.85□□□□□ -0.35
VSX1-207ENST00000557285 ZNF616Q08AN1 781 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms