RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MPTX1A8MV57 137 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 EML2O95834 649 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 GPX1P07203 203 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PRSS53Q2L4Q9 553 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 OTPQ5XKR4 325 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PTCRAQ6ISU1 281 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 RBBP6Q7Z6E9 1792 aaKnown RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 BATF2Q8N1L9 274 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PGLYRP3Q96LB9 341 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 DEFB127Q9H1M4 99 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 CEACAM4O75871 244 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PPBPP02775 128 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 RCC1P18754 421 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 EFNB2P52799 333 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 TEX37Q96LM6 180 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 A0A087WWC5 75 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 GAPTQ8N292 157 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 CIARTQ8N365 385 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 OR2H1Q9GZK4 316 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 STARD6P59095 220 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 F11RQ9Y624 299 aaKnown RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 A0A0U1RQV5 110 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 LOXL2Q9Y4K0 774 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 USF3Q68DE3 2245 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 ATP6V0CP27449 155 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 SSC4DQ8WTU2 575 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 MRPL24Q96A35 216 aaKnown RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 ST6GAL2Q96JF0 529 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 TMEM222Q9H0R3 208 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 DNAJC4Q9NNZ3 241 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 SMPXQ9UHP9 88 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 ASPDHA6ND91 283 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 SSPNQ14714 243 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 CD1AP06126 327 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 C1orf220Q5T0J3 134 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 RSPO2Q6UXX9 243 aaPredicted RBP7.71□□□□□ -1.17
SYNE3-205ENST00000557275 GCSAMQ8N6F7 178 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 PAPPAQ13219 1627 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 A0A1B0GUT8 65 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 RRHO14718 337 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 HYAL3O43820 417 aaPredicted RBP7.71□□□□□ -1.17
SYNE3-205ENST00000557275 NDUFB4O95168 129 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 LINC00518Q8N0U6 118 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 CLDND2Q8NHS1 167 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 DUTP33316 252 aaKnown RBP7.71□□□□□ -1.17
SYNE3-205ENST00000557275 OPN3Q9H1Y3 402 aaPredicted RBP7.71□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF576Q9H609 170 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 RNF7Q9UBF6 113 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 LRP6O75581 1613 aa7.71□□□□□ -1.17
SYNE3-205ENST00000557275 FAM57AQ8TBR7 257 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 MBNL2Q5VZF2 373 aaKnown RBP7.71□□□□□ -1.18
SYNE3-205ENST00000557275 SLC25A37Q9NYZ2 338 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 ORMDL3Q8N138 153 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 PRSS27Q9BQR3 290 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 RPL31P62899 125 aaKnown RBP7.71□□□□□ -1.18
SYNE3-205ENST00000557275 HAPLN4Q86UW8 402 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 C12orf76Q8N812 135 aaPredicted RBP7.71□□□□□ -1.18
SYNE3-205ENST00000557275 SLC6A13Q9NSD5 602 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 PRRC2AP48634 2157 aaKnown RBP7.71□□□□□ -1.18
SYNE3-205ENST00000557275 ZFYVE26Q68DK2 2539 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 PARP14Q460N5 1801 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 KIRREL2Q6UWL6 708 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 APOBEC4Q8WW27 367 aaKnown RBP7.71□□□□□ -1.18
SYNE3-205ENST00000557275 FOXF1Q12946 379 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 FAM27D1Q5T7N8 215 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 TMEFF1Q8IYR6 380 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 NRSN2Q9GZP1 204 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 PRDM13Q9H4Q3 707 aa7.71□□□□□ -1.18
SYNE3-205ENST00000557275 KCNE1BA0A087WTH5 132 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 A0A1W2PP11 408 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 MYOGP15173 224 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 IFI27P40305 119 aaPredicted RBP7.7□□□□□ -1.18
SYNE3-205ENST00000557275 RBM11P57052 281 aaKnown RBP7.7□□□□□ -1.18
SYNE3-205ENST00000557275 SPEM2Q0P670 501 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 XAF1Q6GPH4 301 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 INO80CQ6PI98 192 aaPredicted RBP7.7□□□□□ -1.18
SYNE3-205ENST00000557275 SF3B6Q9Y3B4 125 aaKnown RBP7.7□□□□□ -1.18
SYNE3-205ENST00000557275 J3QT63 122 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 COX7A1P24310 79 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 SPEM1Q8N4L4 309 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 TMEM160Q9NX00 188 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 GPR132Q9UNW8 380 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF83P51522 516 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 RIPPLY3P57055 190 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 PDLIM7Q9NR12 457 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 PLCH1Q4KWH8 1693 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 UCP2P55851 309 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 ECSCRQ19T08 205 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 CHODLQ9H9P2 273 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 F8WEM9 126 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 NKX2-2O95096 273 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 RNF224P0DH78 156 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF32P17041 273 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 PCGF1Q9BSM1 259 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms