RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GYPAP02724 150 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 IGKV1D-39P04432 117 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 CD200P41217 278 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 TNFAIP6P98066 277 aaPredicted RBP12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 DHRS7BQ6IAN0 325 aaPredicted RBP12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 NIT2Q9NQR4 276 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 PLXNB1O43157 2135 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 KIAA1549Q9HCM3 1950 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 K7EM74 188 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 PRRG2O14669 202 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 HIST1H2BAQ96A08 127 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 CLCF1Q9UBD9 225 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 IQCF6A8MYZ5 107 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 K7N7A8 449 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 TNFSF4P23510 183 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 S100A2P29034 98 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 TNFRSF9Q07011 255 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 NCR3LG1Q68D85 454 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF880Q6PDB4 577 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 Q6ZR03 302 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 DYNLRB1Q9NP97 96 aa12.87□□□□□ -0.35
TMEM55B-207ENST00000557041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.357e-8■■■□□ 17.2
TMEM55B-207ENST00000557041 MKRN2OSH3BPM6 223 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 ACTL6BO94805 426 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 GAB2Q9UQC2 676 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF737O75373 536 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 SLC25A6P12236 298 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF585BQ52M93 769 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF645Q8N7E2 425 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 WDR31Q8NA23 367 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 OR10G4Q8NGN3 311 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 OR10G9Q8NGN4 311 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 OR10G7Q8NGN6 311 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 STARD4Q96DR4 205 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 MARCH11A6NNE9 402 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 MT-ND4LP03901 98 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 RAB5AP20339 215 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 GFRALQ6UXV0 394 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 ABHD12Q8N2K0 398 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 EDARADDQ8WWZ3 215 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 TVP23CQ96ET8 276 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 COQ2Q96H96 371 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
TMEM55B-207ENST00000557041 TMEM210A6NLX4 147 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 APELAP0DMC3 54 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 EIF2S3P41091 472 aaKnown RBP12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 RBMS3Q6XE24 437 aaKnown RBP12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 HIPK2Q9H2X6 1198 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 PIGBOS1A0A0B4J2F0 54 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 AHRRA9YTQ3 701 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 PAX9P55771 341 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 KIAA1456Q9P272 454 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 TNRC6AQ8NDV7 1962 aaKnown RBP12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 PSMB3P49720 205 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 MZT1Q08AG7 82 aa12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 TAF15Q92804 592 aaKnown RBP eCLIP12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 RCC1LQ96I51 464 aaKnown RBP12.85□□□□□ -0.35
TMEM55B-207ENST00000557041 TRAV38-1A0A0B4J264 116 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 AQP7O14520 342 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 YIF1AO95070 293 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 TFF3Q07654 80 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 SPRNQ5BIV9 151 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 QTRT1Q9BXR0 403 aaKnown RBP12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 ARV1Q9H2C2 271 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 DCAF16Q9NXF7 216 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNRD1Q9P1U0 126 aa12.84□□□□□ -0.35
TMEM55B-207ENST00000557041 LINC00473A8K010 186 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 IGHV3-48P01763 117 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 ZNF146Q15072 292 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 DUX4L9Q6RFH8 374 aaPredicted RBP12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 CD177Q8N6Q3 437 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 FAM216BQ8N7L0 139 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 FRZBQ92765 325 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 CABLES2Q9BTV7 478 aa12.83□□□□□ -0.35
TMEM55B-207ENST00000557041 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 P2RY6Q15077 328 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 SNRNP40Q96DI7 357 aaKnown RBP12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 OR5B12Q96R08 314 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 TRGV10A0A0A0MS01 117 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 TRGV8A0A0C4DH27 118 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 A0A1W2PPQ1 181 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 PAGE4O60829 102 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 CD82P27701 267 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 GCSAMLQ5JQS6 135 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 WDR25Q64LD2 544 aaPredicted RBP12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 GATAD1Q8WUU5 269 aa12.83□□□□□ -0.36
TMEM55B-207ENST00000557041 TGIF2-C20orf24A0A0A6YYL0 155 aa12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 ZNF98A6NK75 572 aa12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 COLCA2A8K830 154 aa12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 COX5AP20674 150 aa12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 ZNF525Q8N782 197 aa12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 C15orf54Q8N8G6 183 aa12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 PINX1Q96BK5 328 aaKnown RBP12.82□□□□□ -0.36
TMEM55B-207ENST00000557041 LRRC30A6NM36 301 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms