RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 VAMP5O95183 116 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM50AO95807 157 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 REG1AP05451 166 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SERPINA7P05543 415 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CD55P08174 381 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 LINC00271P0C7V0 271 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CRISP2P16562 243 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SELEP16581 610 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 COX5AP20674 150 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 KITLGP21583 273 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 F2RP25116 425 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 EPHA8P29322 1005 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 GCH1P30793 250 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CHRNB4P30926 498 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OTX1P32242 354 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CHRNA7P36544 502 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CAPZBP47756 277 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CCR5P51681 352 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 FOXG1P55316 489 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CLDN17P56750 224 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 RBM11P57052 281 aaKnown RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 RPS20P60866 119 aaKnown RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 RPL15P61313 204 aaKnown RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SLC38A11Q08AI6 406 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM267Q0VDI3 215 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 Q0VG73 95 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 MYBPHQ13203 477 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 UBE2V1Q13404 147 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR5I1Q13606 314 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF726P1Q15940 193 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 BATFQ16520 125 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CLEC12BQ2HXU8 276 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM249Q2WGJ8 235 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM196Q5HYL7 178 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 C9orf50Q5SZB4 431 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 C10orf128Q5T292 105 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 FAM78BQ5VT40 261 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 FBXW9Q5XUX1 488 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TOMM20LQ6UXN7 152 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF818PQ6ZRF7 136 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SMIM15Q7Z3B0 74 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 LINC00596Q86U02 117 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 BAGE3Q86Y29 109 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 BAGE2Q86Y30 109 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 WDFY1Q8IWB7 410 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 MKXQ8IYA7 352 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SAXO1Q8IYX7 474 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 GAPTQ8N292 157 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 C11orf42Q8N5U0 333 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TCTEX1D1Q8N7M0 179 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SIGLECL1Q8N7X8 197 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 C11orf44Q8N8P7 122 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR5AU1Q8NGC0 362 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR10G9Q8NGN4 311 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR10G7Q8NGN6 311 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR5B3Q8NH48 314 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 MBD3L2Q8NHZ7 208 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 KCNE4Q8WWG9 221 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 PATE1Q8WXA2 126 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 C22orf15Q8WYQ4 148 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR5P3Q8WZ94 311 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 PIGCQ92535 297 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 DEFB118Q96PH6 123 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CIB3Q96Q77 187 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 YPEL2Q96QA6 119 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 OR4C12Q96R67 309 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 RASL10BQ96S79 203 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 HSPB9Q9BQS6 159 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM204Q9BSN7 226 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 RSG1Q9BU20 258 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM147Q9BVK8 224 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SAMD10Q9BYL1 202 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 PARLQ9H300 379 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 ZDHHC11Q9H8X9 412 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 PATZ1Q9HBE1 687 aaKnown RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 DNAJC4Q9NNZ3 241 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 HEYLQ9NQ87 328 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-208ENST00000556956 CCL28Q9NRJ3 127 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 KCNIP2Q9NS61 270 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 SLC7A10Q9NS82 523 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF586Q9NXT0 402 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 PLEK2Q9NYT0 353 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 KLRF1Q9NZS2 232 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 TAAR3PQ9P1P4 343 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 B3GAT1Q9P2W7 334 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 UQCR10Q9UDW1 63 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 RNF115Q9Y4L5 304 aa2.42□□□□□ -2.02
SLIRP-208ENST00000556956 NUP210Q8TEM1 1887 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 KIF26AQ9ULI4 1882 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 CKAP5Q14008 2032 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SAA2-SAA4A0A096LPE2 208 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TRBV6-6A0A0A6YYG2 114 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 IGKV1-12A0A0C4DH73 117 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SPTY2D1-AS1A0A0U1RR47 76 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF816-ZNF321PA0A0X1KG74 233 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 A0A1B0GX78 115 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 A0A1W2PPV4 95 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 A0A1W2PQF6 199 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C5orf63A6NC05 138 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms