RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 C6orf201Q7Z4U5 140 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 LAX1Q8IWV1 398 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 SVOPQ8N4V2 548 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 ZFP41Q8N8Y5 198 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 OR2K2Q8NGT1 345 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 SETD6Q8TBK2 473 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 DDB2Q92466 427 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 SNAPC3Q92966 411 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 PGLYRP3Q96LB9 341 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 NEDD4LQ96PU5 975 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 ST6GALNAC5Q9BVH7 336 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 TINAGL1Q9GZM7 467 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 C11orf54Q9H0W9 315 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 FGF20Q9NP95 211 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 OR1A1Q9P1Q5 309 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 PEMTQ9UBM1 199 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 BLOC1S6Q9UL45 172 aa6.81□□□□□ -1.32
HNRNPC-227ENST00000556897 A0A0B4J203 849 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 ITGB1BP1O14713 200 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 ATP6V1G2O95670 118 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 NAPSAO96009 420 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 APELAP0DMC3 54 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 DCKP27707 260 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 CEACAM6P40199 344 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 LGALS7P47929 136 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 GUCA2BQ16661 112 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 OR10K2Q6IF99 312 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 PDPNQ86YL7 162 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 CDH26Q8IXH8 852 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 RPP25LQ8N5L8 163 aaKnown RBP6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 DYNLRB2Q8TF09 96 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 USMG5Q96IX5 58 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 TSC22D3Q99576 134 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 CHMP1AQ9HD42 196 aaPredicted RBP6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 COA4Q9NYJ1 87 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 CLEC2DQ9UHP7 191 aa6.8□□□□□ -1.32
HNRNPC-227ENST00000556897 PNMA8CA0A1B0GUJ8 204 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 LOC100130705A0A1B0GUX0 176 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 BMPR1BO00238 502 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 AIREO43918 545 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 WBP4O75554 376 aaKnown RBP6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 IGLV2-23P01705 113 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 APOA2P02652 100 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 MYL12AP19105 171 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 EDN2P20800 178 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 ZBTB25P24278 435 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 HTR2CP28335 458 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 DEFB114Q30KQ6 69 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 ZNF880Q6PDB4 577 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 NKAIN3Q8N8D7 197 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 ADAD2Q8NCV1 583 aaKnown RBP6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 EDARADDQ8WWZ3 215 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 WDR89Q96FK6 387 aaPredicted RBP6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 DERL3Q96Q80 235 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 SLC29A1Q99808 456 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 OVOL2Q9BRP0 275 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 UQCC2Q9BRT2 126 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 GHRLQ9UBU3 117 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
HNRNPC-227ENST00000556897 NUPR2A6NF83 97 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 MSGN1A6NI15 193 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 M0R1X1 148 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 CIB2O75838 187 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 PRH1P02810 166 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 CRYGBP07316 175 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 SCTP09683 121 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 RHOGP84095 191 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 EWSR1Q01844 656 aaKnown RBP eCLIP6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 MOB1BQ7L9L4 216 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 PTX4Q96A99 478 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 HARBI1Q96MB7 349 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 PHB2Q99623 299 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 NICN1Q9BSH3 213 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 HDHD3Q9BSH5 251 aaPredicted RBP6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 TMEM59Q9BXS4 323 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 KCNK15Q9H427 330 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 SLC35D1Q9NTN3 355 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 ZNF230Q9UIE0 474 aaPredicted RBP6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 ZNF221Q9UK13 617 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 DIMT1Q9UNQ2 313 aaKnown RBP6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 SELENOKQ9Y6D0 94 aa6.78□□□□□ -1.32
HNRNPC-227ENST00000556897 A0A0J9YWU9 116 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 C2orf70A6NJV1 201 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 DEDDO75618 318 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 OR9G9P0C7N8 305 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 FOLR2P14207 255 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 KIR2DS2P43631 304 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 RASSF2P50749 326 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 RPS27AP62979 156 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 HLA-DRB3P79483 266 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 ATP5G2Q06055 141 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 UNC119Q13432 240 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 EXOSC2Q13868 293 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 MRGPRG-AS1Q2M3A8 158 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 SLC16A13Q7RTY0 426 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 ZNF485Q8NCK3 441 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 KCNG3Q8TAE7 436 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 GGTLC1Q9BX51 225 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms