RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 H0YJW9 148 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 GPR31O00270 319 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 PEX14O75381 377 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 RLN1P04808 185 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 CD1BP29016 333 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 UBA52P62987 128 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 OR51H1Q8NH63 302 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 PITPNC1Q9UKF7 332 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 NAV3Q8IVL0 2385 aa11.26□□□□□ -0.61
VIPAS39-208ENST00000556412 LINC00473A8K010 186 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 UPK1BO75841 260 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 S100GP29377 79 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 RPL30P62888 115 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 HABP2Q14520 560 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 CCBE1Q6UXH8 406 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 ZBTB34Q8NCN2 500 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 BVESQ8NE79 360 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 OR5AN1Q8NGI8 311 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 OR2T10Q8NGZ9 312 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 DEDD2Q8WXF8 326 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 HSD17B10Q99714 261 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 SLC2A8Q9NY64 477 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 WASHC3Q9Y3C0 194 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 A6NDX4 124 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 TRIM77I1YAP6 450 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 GPR137BO60478 399 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 FCGR3BO75015 233 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 MOSP00540 346 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 MC5RP33032 325 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 CCR6P51684 374 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 UCP3P55916 312 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 CBX3Q13185 183 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 ZNF66Q6ZN08 573 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 PRIMA1Q86XR5 153 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 ZFAND1Q8TCF1 268 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 RSRP1Q9BUV0 290 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 MXRA5Q9NR99 2828 aa11.25□□□□□ -0.61
VIPAS39-208ENST00000556412 NAP1L6A6NFF2 107 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 FAM90A9PA6NNJ1 464 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 CLDN34H7C241 214 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 CHST1O43916 411 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 PGLYRP1O75594 196 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 ECI1P42126 302 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 CATR1Q13166 79 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 MSMO1Q15800 293 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 RTL8BQ17RB0 113 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 C16orf87Q6PH81 154 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 SLC2A9Q9NRM0 540 aa11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 C14orf166Q9Y224 244 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-208ENST00000556412 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 PLA2G10O15496 165 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 LYRM1O43325 122 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 IGKV1-16P04430 117 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 PIGPP57054 158 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 MMDQ15546 238 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 POC5Q8NA72 575 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 FLYWCH2Q96CP2 140 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 C7orf50Q9BRJ6 194 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 RNF212BA8MTL3 300 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 CRYZL1O95825 349 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 CRYBA1P05813 215 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 RPS16P62249 146 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 IFITM3Q01628 133 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 EIF4EBP1Q13541 118 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 DHRS7BQ6IAN0 325 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 TMED4Q7Z7H5 227 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 TBC1D26Q86UD7 250 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 DDB2Q92466 427 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 RITA1Q96K30 269 aa11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 RBM14Q96PK6 669 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-208ENST00000556412 OR2F2O95006 317 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 CTSDP07339 412 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 RRASP10301 218 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 TAGLNQ01995 201 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 EBI3Q14213 229 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 SPAG16Q8N0X2 631 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 ZNF486Q96H40 463 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 SCGB3A2Q96PL1 93 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 RAB18Q9NP72 206 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 TBC1D24Q9ULP9 559 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 VSIG4Q9Y279 399 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
VIPAS39-208ENST00000556412 NF1P21359 2839 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms