RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ERVFC1-1P60608 527 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 HIST1H3AP68431 136 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SRPXP78539 464 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 FMODQ06828 376 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 UNC119Q13432 240 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 RSU1Q15404 277 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 OR8B8Q15620 311 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 C10orf128Q5T292 105 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 HIST2H3PS2Q5TEC6 136 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 FAM27BQ5VT28 67 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A2PQ658T7 463 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 CCDC144NLQ6NUI1 221 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 HAGHLQ6PII5 290 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-240ENST00000556339 CORO6Q6QEF8 472 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 GLIPR1L1Q6UWM5 242 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 BTNL3Q6UXE8 466 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 CFAP77Q6ZQR2 320 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 HIST2H3AQ71DI3 136 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SGPP2Q8IWX5 399 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF101Q8IZC7 436 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 FAM185AQ8N0U4 392 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 OR5AS1Q8N127 324 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SIGLECL1Q8N7X8 197 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 LRTM2Q8N967 370 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-240ENST00000556339 UBAC2Q8NBM4 344 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 POC1AQ8NBT0 407 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 LFNGQ8NES3 379 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 DMBX1Q8NFW5 382 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 OR8G5Q8NG78 346 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 OR52N4Q8NGI2 321 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 OR51A2Q8NGJ7 313 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 ITLN1Q8WWA0 313 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 GLMPQ8WWB7 406 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 DCUN1D4Q92564 292 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 MRGPRFQ96AM1 343 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SPSB1Q96BD6 273 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 CMBLQ96DG6 245 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 GALNT14Q96FL9 552 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 POM121L2Q96KW2 1035 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 DUX5Q96PT3 197 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 S100A13Q99584 98 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 RNF126Q9BV68 326 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SELENOIQ9C0D9 397 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 OR2H1Q9GZK4 316 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 WNT5BQ9H1J7 359 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 ARV1Q9H2C2 271 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 RGCCQ9H4X1 137 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 TNFRSF19Q9NS68 423 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 CENPMQ9NSP4 180 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 FAM212BQ9NTI7 297 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM106BQ9NUM4 274 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 UQCC1Q9NVA1 299 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 PLEK2Q9NYT0 353 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 MLXQ9UH92 298 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 ATPIF1Q9UII2 106 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 PPP1R3CQ9UQK1 317 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 STARD10Q9Y365 291 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 STRAPQ9Y3F4 350 aaKnown RBP3.25□□□□□ -1.89
ATXN3-240ENST00000556339 KPTNQ9Y664 436 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 V9GYS6 101 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 MGAM2Q2M2H8 2515 aa3.25□□□□□ -1.89
ATXN3-240ENST00000556339 IGHV3OR16-10A0A075B7F0 116 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 IGKV1D-43A0A0B4J1Z2 117 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 IGHV3-64DA0A0J9YX35 117 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 DUXBA0A1W2PPF3 345 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 MEIS3P1A6NDR6 274 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 BTBD17A6NE02 478 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A18PA6NE21 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A16PA6NEW6 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A20PA6NIJ5 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A7PA6NKC0 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 LRRC30A6NM36 301 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FOXI3A8MTJ6 420 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF705EA8MWA4 302 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A22PA8MWA6 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A12PA8MX19 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A5PA8MXJ8 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A23PA8MXZ1 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM25EA8MYX2 175 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 E5RGE8 158 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 RNASEK-C17orf49H0YIS7 233 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 IFNL4K9M1U5 179 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 SSX5O60225 188 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
ATXN3-240ENST00000556339 DHRS3O75911 302 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 LCATP04180 440 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 HCKP08631 526 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A15PP0C7V4 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 FAM90A14PP0C7W9 464 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 COX5BP10606 129 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 MMP9P14780 707 aa3.24□□□□□ -1.89
ATXN3-240ENST00000556339 RPS2P15880 293 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms