RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 RGP1Q92546 391 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 SPSB1Q96BD6 273 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 FEVQ99581 238 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 NIPSNAP1Q9BPW8 284 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF251Q9BRH9 671 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 CST11Q9H112 138 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 REEP1Q9H902 201 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 PARP11Q9NR21 331 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 FAM118AQ9NWS6 357 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 SIGLEC8Q9NYZ4 499 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 RNF150Q9ULK6 438 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 FOXA2Q9Y261 457 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 SAMHD1Q9Y3Z3 626 aaKnown RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 NUBP2Q9Y5Y2 271 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 TRAV24A0A0B4J272 114 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 A0A1W2PN81 502 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PGPEP1LA6NFU8 196 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF670-ZNF695F2Z2N8 137 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SDCBPO00560 298 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SLC22A1O15245 554 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SOX15O60248 233 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PAGE4O60829 102 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 RPP14O95059 124 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ALPLP05186 524 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 KRT8P05787 483 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 DBTP11182 482 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SSTR5P35346 364 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CHRNA7P36544 502 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SERPINB10P48595 397 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF137PP52743 207 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CD81P60033 236 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ACTBP60709 375 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CDK5Q00535 292 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF846Q147U1 533 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 C5orf64Q2M2E5 130 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 MOGAT2Q3SYC2 334 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 AKIRIN2Q53H80 203 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PAN3Q58A45 887 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 RSBN1Q5VWQ0 802 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ELP2Q6IA86 826 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CD200R1LQ6Q8B3 271 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PLEKHG7Q6ZR37 379 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SLC25A48Q6ZT89 311 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 NOXA1Q86UR1 476 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 LAX1Q8IWV1 398 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 C8orf59Q8N0T1 100 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF555Q8NEP9 628 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 OR9G4Q8NGQ1 327 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 OR2K2Q8NGT1 345 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CNIH3Q8TBE1 160 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 GIPC3Q8TF64 312 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CYGBQ8WWM9 190 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ARL11Q969Q4 196 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ADAT3Q96EY9 351 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 OPALINQ96PE5 141 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 MS4A10Q96PG2 267 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SPACA5Q96QH8 159 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CNN2Q99439 309 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 NEURL2Q9BR09 285 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 TTTY10Q9BZA0 68 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SLA2Q9H6Q3 261 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PLEKHA3Q9HB20 300 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 NEK6Q9HC98 313 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CLN6Q9NWW5 311 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 SLC2A8Q9NY64 477 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 TVP23BQ9NYZ1 205 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 CNOT2Q9NZN8 540 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 PAIP2BQ9ULR5 123 aaKnown RBP3.63□□□□□ -1.83
ATXN3-239ENST00000556315 TPRKBQ9Y3C4 175 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 ORC6Q9Y5N6 252 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 FRAS1Q86XX4 4008 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 DNAH10Q8IVF4 4471 aa3.63□□□□□ -1.83
ATXN3-239ENST00000556315 TRAV39A0A0B4J263 110 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 A0A0G2JLM5 398 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 C13orf42A0A1B0GVH6 325 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 TMEM30CPA0ZSE6 113 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 IZUMO1RA6ND01 250 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 CCDC182A6NF36 153 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 METTL15A6NJ78 407 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 OR11H12B2RN74 326 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 G3V2T6 193 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 H3BMQ9 156 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 C15orf65H3BRN8 121 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 EI24O14681 340 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 NBR2O15453 112 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 LANCL1O43813 399 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 ORC5O43913 435 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 SULT1C4O75897 302 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 MT-ND2P03891 347 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 CSN3P07498 182 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 UBCP0CG48 685 aaKnown RBP3.62□□□□□ -1.83
ATXN3-239ENST00000556315 CRHBPP24387 322 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-239ENST00000556315 SYNJ2BPP57105 145 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 TPPP2P59282 170 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 CX3CL1P78423 397 aa3.62□□□□□ -1.83
ATXN3-239ENST00000556315 TNFRSF9Q07011 255 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms