RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 NPPCP23582 126 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 CMC4P56277 68 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-216ENST00000556083 LINC00052Q96N35 136 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 SPSB2Q99619 263 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 ZNF256Q9Y2P7 627 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-216ENST00000556083 MGPP08493 103 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 CD40P25942 277 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 HERPUD1Q15011 391 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 SLC25A53Q5H9E4 307 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 KLF14Q8TD94 323 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-216ENST00000556083 GPA33Q99795 319 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 TREM2Q9NZC2 230 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 TMEM14DPA8MWL7 114 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 PATE3B3GLJ2 98 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 GFRA3O60609 400 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 NANOS3P60323 173 aaKnown RBP9.22□□□□□ -0.93
ACTN1-216ENST00000556083 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
ACTN1-216ENST00000556083 FGFRL1Q8N441 504 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 COLQQ9Y215 455 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-216ENST00000556083 CDK5RAP2Q96SN8 1893 aa9.22□□□□□ -0.93
ACTN1-216ENST00000556083 LNP1A1A4G5 178 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 K7ERU9 68 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 MFAP2P55001 183 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 TNFRSF9Q07011 255 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 C3AR1Q16581 482 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 SGMS2Q8NHU3 365 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 DTX4Q9Y2E6 619 aa9.21□□□□□ -0.93
ACTN1-216ENST00000556083 DMRTC1Q5HYR2 192 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 TMEM140Q9NV12 185 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 MRPL22Q9NWU5 206 aaKnown RBP9.21□□□□□ -0.94
ACTN1-216ENST00000556083 ZNF79Q15937 498 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 OR4A47Q6IF82 309 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 ABHD12Q8N2K0 398 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 ZNF738Q8NE65 137 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 RSRP1Q9BUV0 290 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 LHFPL6Q9Y693 200 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 UBR3Q6ZT12 1888 aa9.21□□□□□ -0.94
ACTN1-216ENST00000556083 JOSD1Q15040 202 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-216ENST00000556083 OPN3Q9H1Y3 402 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-216ENST00000556083 RHBDL1O75783 438 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 TM2D1Q9BX74 207 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 ATP5J2P56134 94 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 MGAT2Q10469 447 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 OR11H7Q8NGC8 314 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 DPM3Q9P2X0 92 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 A0A1W2PQM1 296 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 MARCH11A6NNE9 402 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 IER3P46695 156 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 DSCR9P59020 149 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 SPINK9Q5DT21 86 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 FAM166AQ6J272 317 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 SLC16A13Q7RTY0 426 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 OR1N2Q8NGR9 330 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 OR5P3Q8WZ94 311 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 FBLN5Q9UBX5 448 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 TCF19Q9Y242 345 aa9.2□□□□□ -0.94
ACTN1-216ENST00000556083 RECKO95980 971 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 CKS2P33552 79 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 PPP1R32Q7Z5V6 425 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 LRRC75AQ8NAA5 344 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 RNASEH2CQ8TDP1 164 aaKnown RBP9.19□□□□□ -0.94
ACTN1-216ENST00000556083 WNT5BQ9H1J7 359 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 OR51M1Q9H341 326 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 RBKSQ9H477 322 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 PHLDA3Q9Y5J5 127 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 GPX4P36969 197 aaPredicted RBP9.19□□□□□ -0.94
ACTN1-216ENST00000556083 NSUN5P2Q63ZY6 315 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 MRPL54Q6P161 138 aaKnown RBP9.19□□□□□ -0.94
ACTN1-216ENST00000556083 ADAD2Q8NCV1 583 aaKnown RBP9.19□□□□□ -0.94
ACTN1-216ENST00000556083 TNFRSF14Q92956 283 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 TP53RKQ96S44 253 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 IGLV3-12A0A075B6K2 115 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 PRNTQ86SH4 94 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
ACTN1-216ENST00000556083 NUP37Q8NFH4 326 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 FAM57AQ8TBR7 257 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 RAB37Q96AX2 223 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 NKX2-8O15522 239 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 CSN3P07498 182 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 RND2P52198 227 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 LCN2P80188 198 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 COL5A1-AS1Q5SY13 56 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 MTURNQ8N3F0 131 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 POC1AQ8NBT0 407 aa9.19□□□□□ -0.94
ACTN1-216ENST00000556083 SPINK4O60575 86 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 AMY1AP04745 511 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 MYOD1P15172 320 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 PAX1P15863 534 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 CXCL3P19876 107 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-216ENST00000556083 P2RY4P51582 365 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 OR10AG1Q8NH19 301 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 IGKV3D-11A0A0A0MRZ8 115 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 PGPA6NDG6 321 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 CLDND2Q8NHS1 167 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 ZNF703Q9H7S9 590 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms