RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 RPS16P62249 146 aaKnown RBP10.89□□□□□ -0.67
CHMP4BP1-201ENST00000556017 MED21Q13503 144 aa10.89□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SGPP2Q8IWX5 399 aa10.89□□□□□ -0.67
CHMP4BP1-201ENST00000556017 C10orf67Q8IYJ2 551 aa10.89□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TSNAXQ99598 290 aaKnown RBP10.89□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SIGLEC8Q9NYZ4 499 aa10.89□□□□□ -0.67
CHMP4BP1-201ENST00000556017 BPNT1O95861 308 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CD3GP09693 182 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 UCHL1P09936 223 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SRMP19623 302 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 KMT2AQ03164 3969 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PLA2G7Q13093 441 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PLAC9Q5JTB6 97 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 GLT8D1Q68CQ7 371 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SETD9Q8NE22 299 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SETD6Q8TBK2 473 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 EDARADDQ8WWZ3 215 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 THRSPQ92748 146 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TINAGL1Q9GZM7 467 aaPredicted RBP10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 HIPK2Q9H2X6 1198 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RIMS4Q9H426 269 aaPredicted RBP10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PLEKHJ1Q9NW61 149 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
CHMP4BP1-201ENST00000556017 MYL12BO14950 172 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RBM48Q5RL73 367 aaKnown RBP10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TMEM91Q6ZNR0 172 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 DHRSXQ8N5I4 330 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ARHGAP5-AS1Q96IT6 56 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TMED9Q9BVK6 235 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RDH8Q9NYR8 311 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
CHMP4BP1-201ENST00000556017 A0A0G2JLM5 398 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 C13orf42A0A1B0GVH6 325 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 P2RY14Q15391 338 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 MOGAT2Q3SYC2 334 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RNLSQ5VYX0 342 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CEACAM19Q7Z692 300 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 MS4A15Q8N5U1 240 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PACRGLQ8N7B6 248 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ADAD2Q8NCV1 583 aaKnown RBP10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 BPIFB6Q8NFQ5 453 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 OR6M1Q8NGM8 313 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PECRQ9BY49 303 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 C12orf4Q9NQ89 552 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ZNF355PQ9NSJ1 428 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SLC35D1Q9NTN3 355 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SDHAF2Q9NX18 166 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PEF1Q9UBV8 284 aaKnown RBP10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 DMRT1Q9Y5R6 373 aa10.86□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ZNF785A8K8V0 405 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 H0Y980 276 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 M0R1X1 148 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 BMPR1BO00238 502 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 SLC17A2O00624 439 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CDK1P06493 297 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 APELAP0DMC3 54 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 EDN2P20800 178 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CD40LGP29965 261 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ZNF45Q02386 682 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 HSD17B12Q53GQ0 312 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TMEM177Q53S58 311 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 IGSF11Q5DX21 431 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 BVESQ8NE79 360 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 DDB2Q92466 427 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 FAM110AQ9BQ89 295 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ZNF221Q9UK13 617 aa10.85□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TRDCB7Z8K6 153 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 APOA2P02652 100 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 LGALS7P47929 136 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CLDN12P56749 244 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 IRF3Q14653 427 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 C8orf59Q8N0T1 100 aaPredicted RBP10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 Q8N402 240 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TMEM68Q96MH6 324 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 CABLES2Q9BTV7 478 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 PLEKHA3Q9HB20 300 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 NKX1-2Q9UD57 310 aaPredicted RBP10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 ZNF230Q9UIE0 474 aaPredicted RBP10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 MGAT4AQ9UM21 535 aa10.84□□□□□ -0.67
CHMP4BP1-201ENST00000556017 TRBV9A0A0B4J1U6 114 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 MSGN1A6NI15 193 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 OR2A4O95047 310 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 CNIH1O95406 144 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 CD7P09564 240 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 CMSS1Q9BQ75 279 aaKnown RBP10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 AKIP1Q9NQ31 210 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 AK6Q9Y3D8 172 aaKnown RBP10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
CHMP4BP1-201ENST00000556017 TRBV6-7A0A0A0MS04 114 aa10.82□□□□□ -0.68
CHMP4BP1-201ENST00000556017 LINC00473A8K010 186 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms