RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	OR51H1	Q8NH63	302 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	CAPSL	Q8WWF8	208 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	AJUBA	Q96IF1	538 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	JMJD8	Q96S16	334 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	NABP2	Q9BQ15	211 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	PITPNC1	Q9UKF7	332 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	WASHC3	Q9Y3C0	194 aa		10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	SOX21	Q9Y651	276 aa	Predicted RBP	10.09	□□□□□ -0.79
ABCD4-223	ENST00000555904	HIVEP2	P31629	2446 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	IGHV3-72	A0A0B4J1Y9	119 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904		H3BUX3	64 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	HOXA3	O43365	443 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	PGLYRP1	O75594	196 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	CD1B	P29016	333 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	BTC	P35070	178 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	TAS2R31	P59538	309 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	RND3	P61587	244 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	HABP2	Q14520	560 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904		Q6YL49	198 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	TBC1D26	Q86UD7	250 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	PDPN	Q86YL7	162 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	SGPP2	Q8IWX5	399 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	CENPS	Q8N2Z9	138 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR5AN1	Q8NGI8	311 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR4S2	Q8NH73	311 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	CD300LF	Q8TDQ1	290 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	MRGPRF	Q96AM1	343 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	C5orf30	Q96GV9	206 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	C20orf85	Q9H1P6	137 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	SLC35D1	Q9NTN3	355 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	NUDT15	Q9NV35	164 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	GPR132	Q9UNW8	380 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	POMT1	Q9Y6A1	747 aa		10.08	□□□□□ -0.8
ABCD4-223	ENST00000555904	WNK2	Q9Y3S1	2297 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904		H0YJW9	148 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	MPPED1	O15442	326 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	PROP1	O75360	226 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	B3GALNT1	O75752	331 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	VENTX	O95231	258 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	PTTG1	O95997	202 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	MOS	P00540	346 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	IGKV1D-33	P01593	117 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	IGKV1-33	P01594	117 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	IGHV4-59	P01825	116 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	TCRB	P04435	133 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	SNRNP70	P08621	437 aa	Known RBP	10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	AKR1C4	P17516	323 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	IER3	P46695	156 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	RGS21	Q2M5E4	152 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR2B11	Q5JQS5	317 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	TCTEX1D1	Q8N7M0	179 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	ZNF383	Q8NA42	475 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR2T10	Q8NGZ9	312 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	CFHR4	Q92496	578 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	ZNF48	Q96MX3	618 aa	Predicted RBP	10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	PRDM13	Q9H4Q3	707 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	C5orf66	Q9H5L9	145 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	VSIG4	Q9Y279	399 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	CSPG4	Q6UVK1	2322 aa		10.07	□□□□□ -0.8
ABCD4-223	ENST00000555904	F8	P00451	2351 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	LINC00473	A8K010	186 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	ARPC1B	O15143	372 aa	Known RBP	10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TCF21	O43680	179 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	FCGR3B	O75015	233 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	IFNA2	P01563	188 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	SERPINE2	P07093	398 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	ANXA3	P12429	323 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TMEM11	P17152	192 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	CD24	P25063	80 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	F2R	P25116	425 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TMEM128	Q5BJH2	165 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	PLET1	Q6UQ28	207 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	LIAT1	Q6ZQX7	453 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	THNSL2	Q86YJ6	484 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	SPAG16	Q8N0X2	631 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TMEM86B	Q8N661	226 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR4C13	Q8NGP0	309 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	FLYWCH2	Q96CP2	140 aa	Known RBP	10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	GPHA2	Q96T91	129 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	AIFM2	Q9BRQ8	373 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	RAB18	Q9NP72	206 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TNFRSF19	Q9NS68	423 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	VPREB3	Q9UKI3	123 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TCF19	Q9Y242	345 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	KCNIP3	Q9Y2W7	256 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	NUBP2	Q9Y5Y2	271 aa		10.06	□□□□□ -0.8
ABCD4-223	ENST00000555904	TRAV6	A0A075B6T7	132 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904		A0A0A6YYJ9	748 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	PIGBOS1	A0A0B4J2F0	54 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	C3orf85	A0A1B0GTC6	90 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	CRYM-AS1	A6NIL9	109 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904		H0Y980	276 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	SHOX	O15266	292 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	CRYZL1	O95825	349 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	VAMP1	P23763	118 aa		10.05	□□□□□ -0.8

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