RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DUTP33316 252 aaKnown RBP8.3□□□□□ -1.08
SRP54-208ENST00000555557 BRWD1-AS2P59051 145 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 CTAG1AP78358 180 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 HLA-DRB5Q30154 266 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 NCR3LG1Q68D85 454 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 C1orf122Q6ZSJ8 110 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 CIARTQ8N365 385 aaPredicted RBP8.3□□□□□ -1.08
SRP54-208ENST00000555557 LINC00311Q8N616 119 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 OR13D1Q8NGV5 346 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 LHFPL5Q8TAF8 219 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 ZNF596Q8TC21 504 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 TCTEX1D2Q8WW35 142 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 MSI2Q96DH6 328 aaKnown RBP8.3□□□□□ -1.08
SRP54-208ENST00000555557 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
SRP54-208ENST00000555557 RANGRFQ9HD47 186 aaPredicted RBP8.3□□□□□ -1.08
SRP54-208ENST00000555557 HIF1ANQ9NWT6 349 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 GOSR2O14653 212 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 RAMP3O60896 148 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 ARG1P05089 322 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 HOXB5P09067 269 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 SULT1A3P0DMM9 295 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 SULT1A4P0DMN0 295 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 HOXB4P17483 251 aaPredicted RBP8.29□□□□□ -1.08
SRP54-208ENST00000555557 PAX6P26367 422 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 PRRX1P54821 245 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 CD83Q01151 205 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 PAX8Q06710 450 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LDLRAD2Q5SZI1 272 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 DCAF12L2Q5VW00 463 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LURAP1LQ8IV03 231 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 C8orf31Q8N9H6 132 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 OR4P4Q8NGL7 312 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 COQ8AQ8NI60 647 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LRRC20Q8TCA0 184 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LHX4Q969G2 390 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 TMEM222Q9H0R3 208 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 HEXA-AS1Q9H8Q6 139 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 MGAT4CQ9UBM8 478 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 GAB2Q9UQC2 676 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 MPTX1A8MV57 137 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LEUTXA8MZ59 168 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 H0Y980 276 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 BUB1B-PAK6H3BSN5 160 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 TGFAP01135 160 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 CT45A6P0DMU7 189 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 CT45A5P0DMU8 189 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 CT45A7P0DMV0 189 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 GZMKP49863 264 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 MSMO1Q15800 293 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 ZNF585BQ52M93 769 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 C11orf88Q6PI97 169 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 ZNF66Q6ZN08 573 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LHFPL4Q7Z7J7 247 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 LINC01356Q8N9X3 169 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 ZNF383Q8NA42 475 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 FAM216AQ8WUB2 273 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 ST6GALNAC6Q969X2 333 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 C1orf159Q96HA4 380 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 S1PR3Q99500 378 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 HSD17B10Q99714 261 aaKnown RBP8.29□□□□□ -1.08
SRP54-208ENST00000555557 FOXC2Q99958 501 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 CHIAQ9BZP6 476 aa8.29□□□□□ -1.08
SRP54-208ENST00000555557 UNKLQ9H9P5 680 aaKnown RBP8.29□□□□□ -1.08
SRP54-208ENST00000555557 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 IGHV3OR16-10A0A075B7F0 116 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 DBX1A6NMT0 343 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 FAM25EA8MYX2 175 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 FCGR3BO75015 233 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 C1QBP02746 253 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 SERPINE2P07093 398 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 IGHV4-31P0DP07 118 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 RPA2P15927 270 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 UCP1P25874 307 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 H2BFSP57053 126 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 ZNF816Q0VGE8 651 aaPredicted RBP8.28□□□□□ -1.08
SRP54-208ENST00000555557 CATR1Q13166 79 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 TMEM249Q2WGJ8 235 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 TMEM268Q5VZI3 342 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 ZNF833PQ6ZTB9 187 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 SELENOHQ8IZQ5 122 aaKnown RBP8.28□□□□□ -1.08
SRP54-208ENST00000555557 SPAG16Q8N0X2 631 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.28□□□□□ -1.08
SRP54-208ENST00000555557 BEND2Q8NDZ0 799 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 OR11H6Q8NGC7 330 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 TMEM186Q96B77 213 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 SEC22AQ96IW7 307 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 FYTTD1Q96QD9 318 aaKnown RBP8.28□□□□□ -1.08
SRP54-208ENST00000555557 MRPL20Q9BYC9 149 aaKnown RBP8.28□□□□□ -1.08
SRP54-208ENST00000555557 C7orf69Q9H7B7 122 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 MYO9AB2RTY4 2548 aa8.28□□□□□ -1.08
SRP54-208ENST00000555557 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.08
SRP54-208ENST00000555557 C13orf42A0A1B0GVH6 325 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 LINC00862A6NCI5 91 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 RNF212BA8MTL3 300 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
SRP54-208ENST00000555557 CDS2O95674 445 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 AVPP01185 164 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms