RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NOS1APO75052 506 aaPredicted RBP2.75□□□□□ -1.97
VRK1-205ENST00000555402 OR2B3O76000 313 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 HBZP02008 142 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 OR4A8P0C604 315 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 CD79AP11912 226 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 GADD45AP24522 165 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 FOXA1P55317 472 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 PSME3P61289 254 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 EMX1Q04741 257 aaPredicted RBP2.75□□□□□ -1.97
VRK1-205ENST00000555402 MMDQ15546 238 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 ZCWPW2Q504Y3 356 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 TRMT12Q53H54 448 aaKnown RBP2.75□□□□□ -1.97
VRK1-205ENST00000555402 N4BP2L1Q5TBK1 243 aaPredicted RBP2.75□□□□□ -1.97
VRK1-205ENST00000555402 CYHR1Q6ZMK1 362 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 SLC36A1Q7Z2H8 476 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 LYZL2Q7Z4W2 148 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 VN1R4Q7Z5H5 301 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 EIF4E3Q8N5X7 224 aaKnown RBP2.75□□□□□ -1.97
VRK1-205ENST00000555402 ZNRF2Q8NHG8 242 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 Q8WTZ3 238 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 TNFAIP8L1Q8WVP5 186 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 PYDC1Q8WXC3 89 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 SLC35B4Q969S0 331 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 CMBLQ96DG6 245 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 BTF3L4Q96K17 158 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 IGF2BP2-AS1Q96M15 143 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 SIGMAR1Q99720 223 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 TM2D3Q9BRN9 247 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 C19orf12Q9NSK7 152 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 HDGFL3Q9Y3E1 203 aa2.75□□□□□ -1.97
VRK1-205ENST00000555402 SYNMO15061 1565 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 IGKV3D-11A0A0A0MRZ8 115 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 A0A1W2PNN7 141 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 GGTLC3B5MD39 225 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 EEF1E1O43324 174 aaKnown RBP2.74□□□□□ -1.97
VRK1-205ENST00000555402 SYNGR2O43760 224 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 IFNA14P01570 189 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 CBR1P16152 277 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 CD36P16671 472 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 INPP1P49441 399 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 HPCAP84074 193 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 CENPWQ5EE01 88 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 ZNF664Q8N3J9 261 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 CMTM2Q8TAZ6 248 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 KCTD4Q8WVF5 259 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 CPNE2Q96FN4 548 aaPredicted RBP2.74□□□□□ -1.97
VRK1-205ENST00000555402 SLC25A44Q96H78 314 aaPredicted RBP2.74□□□□□ -1.97
VRK1-205ENST00000555402 TRIB3Q96RU7 358 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 KIFC1Q9BW19 673 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 TRIM4Q9C037 500 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 PCBD2Q9H0N5 130 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 OR2D2Q9H210 308 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 DCSTAMPQ9H295 470 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 OR51I2Q9H344 312 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 C11orf49Q9H6J7 331 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 ENY2Q9NPA8 101 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 UBQLN4Q9NRR5 601 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 ARMC1Q9NVT9 282 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 DOK5Q9P104 306 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 ZNF230Q9UIE0 474 aaPredicted RBP2.74□□□□□ -1.97
VRK1-205ENST00000555402 HHLA2Q9UM44 414 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 PRELID3BQ9Y3B1 194 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 FAM32AQ9Y421 112 aaKnown RBP2.74□□□□□ -1.97
VRK1-205ENST00000555402 U3KQK5 164 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 PIK3C2GO75747 1445 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 SHANK1Q9Y566 2161 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 NID2Q14112 1375 aa2.74□□□□□ -1.97
VRK1-205ENST00000555402 B4DEV8 164 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 CRYBA1P05813 215 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 TMEM33P57088 247 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 GABARAPL2P60520 117 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 RAB4BP61018 213 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 BTN3A2P78410 334 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 PSG4Q00888 419 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 TNFRSF9Q07011 255 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 EBPQ15125 230 aaKnown RBP2.73□□□□□ -1.97
VRK1-205ENST00000555402 KRTAP25-1Q3LHN0 102 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 MESTQ5EB52 335 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 ZBTB8OSQ8IWT0 167 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 ZNF676Q8N7Q3 588 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 OR11G2Q8NGC1 345 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 OR9I1Q8NGQ6 314 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 SFRP2Q96HF1 295 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 DIRAS2Q96HU8 199 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 OR52B2Q96RD2 323 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 NMNAT1Q9HAN9 279 aaPredicted RBP2.73□□□□□ -1.97
VRK1-205ENST00000555402 TMEM216Q9P0N5 145 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 SMPXQ9UHP9 88 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 CARHSP1Q9Y2V2 147 aaKnown RBP2.73□□□□□ -1.97
VRK1-205ENST00000555402 PHLDA3Q9Y5J5 127 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 KMT2EQ8IZD2 1858 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 NUP205Q92621 2012 aa2.73□□□□□ -1.97
VRK1-205ENST00000555402 A0A087WUJ7 227 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 PQLC2LA1A4F0 135 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 C5orf49A4QMS7 147 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 CPSF4O95639 269 aaKnown RBP2.72□□□□□ -1.97
VRK1-205ENST00000555402 OR5G3P0C626 314 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 OR12D1P0DN82 309 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 KCNE1P15382 129 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms