RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 APLNQ9ULZ1 77 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 DMRT1Q9Y5R6 373 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 LRP1BQ9NZR2 4599 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 TRBV9A0A0B4J1U6 114 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 TMEM213A2RRL7 107 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 FAM90A7PA6NKC0 464 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 RTL8CO15255 209 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 GGCTO75223 188 aaKnown RBP7.12□□□□□ -1.27
SCFD1-215ENST00000555259 DCTN3O75935 186 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 OR2C1O95371 312 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 BAG2O95816 211 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 CRYGBP07316 175 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 UXS1Q8NBZ7 420 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 OR1L6Q8NGR2 347 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 GPR148Q8TDV2 347 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 MRPL48Q96GC5 212 aaKnown RBP7.12□□□□□ -1.27
SCFD1-215ENST00000555259 SELENOIQ9C0D9 397 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 BANF2Q9H503 90 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 TCRBV3S1A0A5B6 114 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 IGLL5B9A064 214 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 ITGB1BP1O14713 200 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 PDCD6O75340 191 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 APOA2P02652 100 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 MGMTP16455 207 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 CAPGP40121 348 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 MRPL28Q13084 256 aaKnown RBP7.11□□□□□ -1.27
SCFD1-215ENST00000555259 SLC25A30Q5SVS4 291 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 GLIPR1L1Q6UWM5 242 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 GPHB5Q86YW7 130 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 MUL1Q969V5 352 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 FAM46BQ96A09 425 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 ORAI1Q96D31 301 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 MYCBPQ99417 103 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-215ENST00000555259 THTPAQ9BU02 230 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 GABARAPL3Q9BY60 117 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 GABARAPL1Q9H0R8 117 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 EXOGQ9Y2C4 368 aaKnown RBP7.11□□□□□ -1.27
SCFD1-215ENST00000555259 ARL2BPQ9Y2Y0 163 aa7.11□□□□□ -1.27
SCFD1-215ENST00000555259 A8MWP6 167 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 FCGR2BP31994 310 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-215ENST00000555259 GTF2A1P52655 376 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-215ENST00000555259 GBX2P52951 348 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-215ENST00000555259 FLOT2Q14254 428 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 MRGPRG-AS1Q2M3A8 158 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 FAM209BQ5JX69 171 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 ZDHHC13Q8IUH4 622 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 OR2C3Q8N628 320 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 NECAP1Q8NC96 275 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 TRUB1Q8WWH5 349 aaKnown RBP7.1□□□□□ -1.27
SCFD1-215ENST00000555259 LGALS12Q96DT0 336 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 Q96M66 194 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 C11orf54Q9H0W9 315 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-215ENST00000555259 UBQLN2Q9UHD9 624 aa7.1□□□□□ -1.27
SCFD1-215ENST00000555259 EXOSC1Q9Y3B2 195 aaKnown RBP7.1□□□□□ -1.27
SCFD1-215ENST00000555259 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 MPPED1O15442 326 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 CRTAPO75718 401 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-215ENST00000555259 T-ENOLP0DO92 83 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 IGFBP3P17936 291 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-215ENST00000555259 RPL35AP18077 110 aaKnown RBP7.09□□□□□ -1.27
SCFD1-215ENST00000555259 MAP2K4P45985 399 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 MFAP2P55001 183 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 AWAT2Q6E213 333 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
SCFD1-215ENST00000555259 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 EDARADDQ8WWZ3 215 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.27
SCFD1-215ENST00000555259 HARBI1Q96MB7 349 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 C11orf68Q9H3H3 251 aaKnown RBP7.09□□□□□ -1.27
SCFD1-215ENST00000555259 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 IMPAD1Q9NX62 359 aa7.09□□□□□ -1.27
SCFD1-215ENST00000555259 OR2J3O76001 311 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 CALB2P22676 271 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 CEACAM6P40199 344 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ATP6AP1Q15904 470 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 TMEM177Q53S58 311 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 MEDAGQ5VYS4 303 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 SLC38A6Q8IZM9 456 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 JAGN1Q8N5M9 183 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 SPAG8Q99932 426 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-215ENST00000555259 RARRES2Q99969 163 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ERVK13-1Q9NX77 482 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 OR1A1Q9P1Q5 309 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 TRAV8-7A0A075B6U6 113 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 SRRM4A7MD48 611 aaKnown RBP7.08□□□□□ -1.28
SCFD1-215ENST00000555259 M0R1X1 148 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ZBTB25P24278 435 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 TNXAQ16473 311 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 PRSS8Q16651 343 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ODF3L2Q3SX64 289 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 FAM106AQ4KMX7 169 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 HSP90B2PQ58FF3 399 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 XAF1Q6GPH4 301 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 OR4A47Q6IF82 309 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF880Q6PDB4 577 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms