RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 C2CD3Q4AC94 2353 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 RPP30P78346 268 aaKnown RBP10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 MRPS11P82912 194 aaKnown RBP10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 ADIRFQ15847 76 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 HIST2H3PS2Q5TEC6 136 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 BSCL2Q96G97 398 aaPredicted RBP10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 LINC00470Q9BZP3 86 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZDHHC8Q9ULC8 765 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 C12orf77C9JDV5 145 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 LDLRAD4O15165 306 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 SFTPCP11686 197 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 AGAP20933 346 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZNF462Q96JM2 2506 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 A1L4Q6 167 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 LGALS4P56470 323 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 GFI1BQ5VTD9 330 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 REC114Q7Z4M0 266 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZNRD1Q9P1U0 126 aa10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
ARHGEF40-206ENST00000555232 AKAP13Q12802 2813 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 UMAD1C9J7I0 102 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 SYNGR2O43760 224 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 DEFA4P12838 97 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 C1orf87Q8N0U7 546 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 MRPL37Q9BZE1 423 aaKnown RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 COMMD5Q9GZQ3 224 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 SIRT7Q9NRC8 400 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 ARHGAP32A7KAX9 2087 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 COX5BP10606 129 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 FGF7P21781 194 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 CD24P25063 80 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 TAGLN2P37802 199 aaKnown RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 GNB2P62879 340 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 C1orf147Q96MC9 270 aaPredicted RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 LIME1Q9H400 295 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 PLEKHA2Q9HB19 425 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 PATZ1Q9HBE1 687 aaKnown RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 LPAR3Q9UBY5 353 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 ADGRG4Q8IZF6 3080 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 PPP1R2P9O14990 202 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 OR2C1O95371 312 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 RPS2P15880 293 aaKnown RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 CCL3L1P16619 93 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZNF474Q6S9Z5 364 aaPredicted RBP10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 GPR146Q96CH1 333 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 OR51I2Q9H344 312 aa10.32□□□□□ -0.76
ARHGEF40-206ENST00000555232 CRYM-AS1A6NIL9 109 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 TM4SF5O14894 197 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 S1PR2O95136 353 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZNF25P17030 456 aaPredicted RBP10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 SULT1A1P50225 295 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 QRFPP83859 136 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 FGFRL1Q8N441 504 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 DRAM1Q8N682 238 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 MOB3AQ96BX8 217 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 SH2D2AQ9NP31 389 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 HILPDAQ9Y5L2 63 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 IGHV3OR16-10A0A075B7F0 116 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 IGKV3D-15A0A087WSY6 115 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 ODAMA1E959 279 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 CST4P01036 141 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 HSPB1P04792 205 aaKnown RBP10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 OR5G3P0C626 314 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 CSRP1P21291 193 aaKnown RBP10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 KITLGP21583 273 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 CCL1P22362 96 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 OTX1P32242 354 aaPredicted RBP10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 LRRC10Q5BKY1 277 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 IL34Q6ZMJ4 242 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 R3HDM4Q96D70 268 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 ARV1Q9H2C2 271 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 NCBP2LA6PVI3 153 aaKnown RBP10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 CD40P25942 277 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZNF345Q14585 488 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 TVP23CQ96ET8 276 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZDHHC11Q9H8X9 412 aa10.31□□□□□ -0.76
ARHGEF40-206ENST00000555232 SLC25A6P12236 298 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 ATP6V0CP27449 155 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 SLC38A11Q08AI6 406 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 BATFQ16520 125 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 OOEPA6NGQ2 149 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 RAMP3O60896 148 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 IGHV2-5P01817 119 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 FOLR2P14207 255 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 RAB31Q13636 194 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 TGIF2LYQ8IUE0 185 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 TMEM252Q8N6L7 170 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 ABHD14AQ9BUJ0 271 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 NMES1Q9C002 83 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 IL36GQ9NZH8 169 aa10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 SLC25A10Q9UBX3 287 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF40-206ENST00000555232 OR7C2O60412 319 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms