RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DCUN1D2Q6PH85 259 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 CLEC20AQ6ZU45 233 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 LYZL2Q7Z4W2 148 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 TMEM25Q86YD3 366 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 C12orf29Q8N999 325 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZIC4Q8N9L1 334 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 GATD1Q8NB37 220 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 DTD1Q8TEA8 209 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 CLDN23Q96B33 292 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 TMA16Q96EY4 203 aaKnown RBP2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 MRAP2Q96G30 205 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 PGLYRP3Q96LB9 341 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 CCDC42Q96M95 316 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 PKMYT1Q99640 499 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 FAAP24Q9BTP7 215 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 TAPBPLQ9BX59 468 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 PARVAQ9NVD7 372 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZNF586Q9NXT0 402 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 SCML1Q9UN30 329 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 POMPQ9Y244 141 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 FADS3Q9Y5Q0 445 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 F5P12259 2224 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 DOCK5Q9H7D0 1870 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 CHD7Q9P2D1 2997 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 PTPRJQ12913 1337 aa2.66□□□□□ -1.98
CKS1BP1-201ENST00000555221 LTBP2Q14767 1821 aa2.65□□□□□ -1.98
CKS1BP1-201ENST00000555221 TANC1Q9C0D5 1861 aa2.65□□□□□ -1.98
CKS1BP1-201ENST00000555221 MYO9AB2RTY4 2548 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 CITO14578 2027 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 A0A0B4J2C4 111 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 A0A1B0GX12 115 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 SIGLEC16A6NMB1 481 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 A8MWP4 228 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 SYNGR2O43760 224 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 CPSF4O95639 269 aaKnown RBP2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 PDYNP01213 254 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 IGHMP01871 453 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 AKR1C4P17516 323 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 MSNP26038 577 aaKnown RBP2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 SDC4P31431 198 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 RHOAP61586 193 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 OLIG3Q7RTU3 272 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 MARCH3Q86UD3 253 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 EIF4E3Q8N5X7 224 aaKnown RBP2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 DDI1Q8WTU0 396 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 APOBEC3DQ96AK3 386 aaPredicted RBP2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 LRRC45Q96CN5 670 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 NAGKQ9UJ70 344 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 MCTS1Q9ULC4 181 aaKnown RBP2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 ALPK3Q96L96 1907 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 RALGAPA2Q2PPJ7 1873 aa2.65□□□□□ -1.99
CKS1BP1-201ENST00000555221 SMG1Q96Q15 3661 aaKnown RBP2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 F5H5T6 163 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 F8VZ95 297 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 COCHO43405 550 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 GPR75O95800 540 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 KRT7P08729 469 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 SLC35E2BP0CK96 405 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 TGFBR2P37173 567 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 OR2B6P58173 313 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 CASP8Q14790 479 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 BCL2A1Q16548 175 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 TMEM249Q2WGJ8 235 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 OR10J3Q5JRS4 329 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 SPOPLQ6IQ16 392 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 SSX7Q7RTT5 188 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 PHF13Q86YI8 300 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 CCDC112Q8NEF3 446 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 PDCD6IPQ8WUM4 868 aaKnown RBP2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 DDIT4LQ96D03 193 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 IGF2BP2-AS1Q96M15 143 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 PPP1R2P1Q96PQ5 205 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 HBEGFQ99075 208 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 BBS2Q9BXC9 721 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 CXCL16Q9H2A7 254 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 TAS2R13Q9NYV9 303 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 STOML2Q9UJZ1 356 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 PRR14LQ5THK1 2151 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 HECTD1Q9ULT8 2610 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 CNOT1A5YKK6 2376 aaKnown RBP2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 CACNA1HO95180 2353 aa2.64□□□□□ -1.99
CKS1BP1-201ENST00000555221 RIF1Q5UIP0 2472 aaKnown RBP2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 SDK2Q58EX2 2172 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 OR5H14A6NHG9 310 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 GGTLC3B5MD39 225 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 TMEM250H0YL14 139 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 H3BMM0 161 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 M0QX08 132 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 SULT1C2O00338 296 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 SLC31A1O15431 190 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 ZW10O43264 779 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 TNFAIP8O95379 198 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 GABRA1P14867 456 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 ZNF708P17019 499 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 CRABP2P29373 138 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 HSPA9P38646 679 aaKnown RBP2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 CCR2P41597 374 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 MAGEA6P43360 314 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 RAB31Q13636 194 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms