RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 S1PR2O95136 353 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 CDRT1O95170 752 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 CCNE2O96020 404 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 HLA-DQB2P05538 268 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 SERPINA7P05543 415 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 ADRA2AP08913 450 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 OR5AC1P0C628 307 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 C1GALT1C1LP0DN25 315 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 IL1RNP18510 177 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 SNRPD2P62316 118 aaKnown RBP3.32□□□□□ -1.88
VRK1-203ENST00000555067 TFAMQ00059 246 aaKnown RBP3.32□□□□□ -1.88
VRK1-203ENST00000555067 BTN1A1Q13410 526 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 KCNJ8Q15842 424 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 IAH1Q2TAA2 248 aaPredicted RBP3.32□□□□□ -1.88
VRK1-203ENST00000555067 DAZ4Q86SG3 579 aaKnown RBP3.32□□□□□ -1.88
VRK1-203ENST00000555067 UMODL1-AS1Q8N2C9 162 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 OR8B12Q8NGG6 310 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 ELSPBP1Q96BH3 223 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 PEBP4Q96S96 227 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 GINS3Q9BRX5 216 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 CXorf21Q9HAI6 301 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 DAZ1Q9NQZ3 744 aaKnown RBP3.32□□□□□ -1.88
VRK1-203ENST00000555067 BATF3Q9NR55 127 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 DHCR7Q9UBM7 475 aaKnown RBP3.32□□□□□ -1.88
VRK1-203ENST00000555067 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 CEP170Q5SW79 1584 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 KIAA1671Q9BY89 1806 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 IGHV3-43A0A0B4J1X8 118 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 TRAV26-2A0A0B4J265 109 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 OR5H14A6NHG9 310 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 KNCNA6PVL3 124 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 RBFOX2O43251 390 aaKnown RBP eCLIP3.31□□□□□ -1.88
VRK1-203ENST00000555067 OR7C2O60412 319 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 APOMO95445 188 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 MT-CO2P00403 227 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 IGHG2P01859 326 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 ELK1P19419 428 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 SERPINB1P30740 379 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 IL15RAQ13261 267 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 UBE2SQ16763 222 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 LRP11Q86VZ4 500 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 OOSP2Q86WS3 158 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 CYB561D1Q8N8Q1 229 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 FER1L6-AS1Q8NA97 138 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 ZHX1-C8orf76Q96EF9 292 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 B9D2Q9BPU9 175 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 FAM96AQ9H5X1 160 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 ZNF286AQ9HBT8 521 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 FAM60AQ9NP50 221 aa3.31□□□□□ -1.88
VRK1-203ENST00000555067 NUP214P35658 2090 aaPredicted RBP3.31□□□□□ -1.88
VRK1-203ENST00000555067 PTPRTO14522 1441 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 DCCP43146 1447 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 GPR75O95800 540 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 CGB3P0DN86 165 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 CGB7P0DN87 165 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 NTF3P20783 257 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 CD34P28906 385 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 CA7P43166 264 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 MNAT1P51948 309 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 WNT4P56705 351 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 RPS20P60866 119 aaKnown RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 TNFAIP6P98066 277 aaPredicted RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 BSPH1Q075Z2 132 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 FABP9Q0Z7S8 132 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 TSNQ15631 228 aaKnown RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 ZCWPW2Q504Y3 356 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 FAM104BQ5XKR9 115 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 UNQ9165/PRO28630Q6UXU0 137 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 TMPPEQ6ZT21 453 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 ZNF433Q8N7K0 673 aaPredicted RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 OR10K1Q8NGX5 313 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 OR13C6PQ8NH95 151 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 CMBLQ96DG6 245 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 MS4A6EQ96DS6 147 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 CNBD2Q96M20 576 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 TMEM147Q9BVK8 224 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 ZNF331Q9NQX6 463 aaPredicted RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 BIN3Q9NQY0 253 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 UQCC1Q9NVA1 299 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 ZNF586Q9NXT0 402 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 TAS2R7Q9NYW3 318 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 RPS6KB2Q9UBS0 482 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 RSL24D1Q9UHA3 163 aaKnown RBP3.3□□□□□ -1.88
VRK1-203ENST00000555067 SLC35A3Q9Y2D2 325 aa3.3□□□□□ -1.88
VRK1-203ENST00000555067 IGSF9BQ9UPX0 1349 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 LINC00862A6NCI5 91 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 PPP5D1E7EU14 171 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 GSTZ1O43708 216 aaPredicted RBP3.29□□□□□ -1.88
VRK1-203ENST00000555067 CCNKO75909 580 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 NRASP01111 189 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 HRASP01112 189 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 KRASP01116 189 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 HLA-DRB1P01911 266 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 NBEAP1P0C6P0 100 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 RAB4BP61018 213 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 HSPE1P61604 102 aaKnown RBP3.29□□□□□ -1.88
VRK1-203ENST00000555067 S100A12P80511 92 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 PLPPR5Q32ZL2 321 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms