RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 UMAD1C9J7I0 102 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SAP18O00422 153 aaKnown RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 XKRYO14609 159 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TAX1BP3O14907 124 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 MLNRO43193 412 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 DNPH1O43598 174 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 IGLV3-25P01717 112 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 HLA-DQB2P05538 268 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 NGFRP08138 427 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CXCL1P09341 107 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ANKRD34CP0C6C1 535 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 AKAIN1P0CW23 69 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 PGA4P0DJD7 388 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 PGA5P0DJD9 388 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 IGLC2P0DOY2 106 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 IGLC3P0DOY3 106 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 B4GALT1P15291 398 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF17P17021 662 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TCN2P20062 427 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 LMO2P25791 158 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 DIO3P55073 304 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 FOXA1P55317 472 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 DLX6P56179 175 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SIRPAP78324 504 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ARG2P78540 354 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 IL10RBQ08334 325 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 C1DQ13901 141 aaKnown RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 MELKQ14680 651 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 GINS1Q14691 196 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 KIR2DS5Q14953 304 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ALG10Q5BKT4 473 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TECRLQ5HYJ1 363 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CLEC12AQ5QGZ9 265 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 AADACL3Q5VUY0 350 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SPATA31B1PQ5VZV4 182 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 MRPL54Q6P161 138 aaKnown RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TNFAIP8L2Q6P589 184 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OPN5Q6U736 354 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 PLXDC2Q6UX71 529 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 Q6ZN92 141 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 Q6ZSR6 202 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 COMMD6Q7Z4G1 85 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CMC1Q7Z7K0 106 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM150AQ86TG1 271 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CALHM3Q86XJ0 350 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TGIF2LYQ8IUE0 185 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 RNF175Q8N4F7 328 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 DEFB125Q8N687 156 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF485Q8NCK3 441 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 GPR32P1Q8NGA4 272 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OR11G2Q8NGC1 345 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OR6K2Q8NGY2 324 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OR2G3Q8NGZ4 309 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OR4C3Q8NH37 302 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OR4L1Q8NH43 312 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 MFSD8Q8NHS3 518 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CLEC4CQ8WTT0 213 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 LRRC58Q96CX6 371 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SMIM19Q96E16 107 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ZMYND19Q96E35 227 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ADTRPQ96IZ2 230 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TSSK2Q96PF2 358 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 HIST1H2AAQ96QV6 131 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 GABRG3Q99928 467 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 C1QTNF4Q9BXJ3 329 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 GABARAPL3Q9BY60 117 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 DPY30Q9C005 99 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SLC35B3Q9H1N7 401 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 OR51I2Q9H344 312 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ELOVL3Q9HB03 270 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ENY2Q9NPA8 101 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CA10Q9NS85 328 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM106BQ9NUM4 274 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 KCNIP1Q9NZI2 227 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 COMMD9Q9P000 198 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 THYN1Q9P016 225 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 CCDC167Q9P0B6 97 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 B9D1Q9UPM9 204 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 FOXA2Q9Y261 457 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 YARS2Q9Y2Z4 477 aaKnown RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SCN8AQ9UQD0 1980 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 SDK2Q58EX2 2172 aa3.7□□□□□ -1.82
ATXN3-227ENST00000554491 ANKHD1Q8IWZ3 2542 aaKnown RBP3.7□□□□□ -1.82
ATXN3-227ENST00000554491 RP1L1Q8IWN7 2480 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 A0A1B0GX51 115 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TRDV1A0A1B0GX56 115 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 A6NDN8 102 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF840PA6NDX5 716 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 FRG2CA6NGY1 282 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 J3QLI3 93 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 DCTN6O00399 190 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 EEF1E1O43324 174 aaKnown RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ALOX12BO75342 701 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 HSBP1O75506 76 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 EEDO75530 441 aaKnown RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 FCN3O75636 299 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 UBL3O95164 117 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 WISP3O95389 354 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 CRYAAP02489 173 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms