RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 CACNA1DQ01668 2161 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 VDAC1P21796 283 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 ERVK11-1P61568 191 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 SLC25A24Q6NUK1 477 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 Q6P435 159 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 FAM185AQ8N0U4 392 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 C1orf87Q8N0U7 546 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 UCP1P25874 307 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 HNF4GQ14541 408 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 Q6ZRM9 215 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 LINC00596Q86U02 117 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 OR51H1Q8NH63 302 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 PACRGQ96M98 296 aaPredicted RBP12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
PPP4R3A-201ENST00000554308 A0A1B0GU03 582 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 DDTP30046 118 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 BAXQ07812 192 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 WDR25Q64LD2 544 aaPredicted RBP12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 C11orf53Q8IXP5 236 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 Q8IYB0 196 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 GPR146Q96CH1 333 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 CXXC4Q9H2H0 198 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 CLEC18AA5D8T8 446 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 PGLYRP1O75594 196 aaPredicted RBP12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 IAPPP10997 89 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 NDUFB7P17568 137 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 KITLGP21583 273 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 IL2RGP31785 369 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 CLEC18CQ8NCF0 446 aa12.29□□□□□ -0.44
PPP4R3A-201ENST00000554308 ELOA3CA0A087WX78 387 aaPredicted RBP12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 KIR2DS1A0A191URI9 304 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 TMEM210A6NLX4 147 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 SH2D1BO14796 132 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 HBE1P02100 147 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 BCL2P10415 239 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 KIR2DS4P43632 304 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 KIR2DS1Q14954 304 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 SSX9Q7RTT3 188 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 OR13D1Q8NGV5 346 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 CA5BP1Q8WTZ4 195 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 TRAPPC2LQ9UL33 140 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 A0A087X0M5 115 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 A0A1B0GX30 115 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 SELLP14151 372 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 CLEC12BQ2HXU8 276 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 NECAP1Q8NC96 275 aa12.28□□□□□ -0.44
PPP4R3A-201ENST00000554308 KIAA1324LA8MWY0 1029 aaPredicted RBP12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 CLDN34H7C241 214 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 PSPNO60542 156 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 TUSC2O75896 110 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 METTL15P1P0C7V9 234 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 PSG2P11465 335 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 RND2P52198 227 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 ZNF146Q15072 292 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 WDR82Q6UXN9 313 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 REC114Q7Z4M0 266 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 STX12Q86Y82 276 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 FAM169BQ8N8A8 192 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 RIMS4Q9H426 269 aaPredicted RBP12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 HAND1O96004 215 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 CYB5R3P00387 301 aaPredicted RBP12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 IFNA5P01569 189 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR5D13Q8NGL4 314 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR4X1Q8NH49 305 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 RCC1LQ96I51 464 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 SDF2L1Q9HCN8 221 aa12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 CISD1Q9NZ45 108 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-201ENST00000554308 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 TUBG1P23258 451 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 ELLP55199 621 aaPredicted RBP12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 PKIAP61925 76 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 Q6ZS49 121 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR10J5Q8NHC4 309 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 TUBG2Q9NRH3 451 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 H0Y980 276 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 HMGB3O15347 200 aaKnown RBP12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 SPRY3O43610 288 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 CCKARP32238 428 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 PCSK4Q6UW60 755 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 H1FOOQ8IZA3 346 aaPredicted RBP12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR10G4Q8NGN3 311 aa12.26□□□□□ -0.45
PPP4R3A-201ENST00000554308 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 POLEQ07864 2286 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 SMCO3A2RU48 225 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 B4DEV8 164 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms