RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 ZNF596Q8TC21 504 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 SMIM4Q8WVI0 70 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 MAFIPQ8WZ33 124 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 SNAPC3Q92966 411 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 MTFP1Q9UDX5 166 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 ANXA10Q9UJ72 324 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 RBMX2Q9Y388 322 aaKnown RBP13.17□□□□□ -0.3
NEK9-204ENST00000554258 YPEL1O60688 119 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 CD24P25063 80 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 ZNF45Q02386 682 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 SSBP1Q04837 148 aaKnown RBP13.16□□□□□ -0.3
NEK9-204ENST00000554258 STEAP3Q658P3 488 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 BEST4Q8NFU0 473 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 FCAMRQ8WWV6 532 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 YPEL2Q96QA6 119 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 AKIP1Q9NQ31 210 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 ZNF107Q9UII5 783 aaPredicted RBP13.16□□□□□ -0.3
NEK9-204ENST00000554258 JPT1Q9UK76 154 aa13.16□□□□□ -0.3
NEK9-204ENST00000554258 PKHD1P08F94 4074 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 TRBV6-7A0A0A0MS04 114 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 IGHV2-26A0A0B4J1V2 119 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 MEIS3P1A6NDR6 274 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 SDCBPO00560 298 aaPredicted RBP13.15□□□□□ -0.3
NEK9-204ENST00000554258 ITGB1BP1O14713 200 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 RBBP9O75884 186 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 IGLV1-47P01700 117 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 AMY1AP04745 511 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 AMY2AP04746 511 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 CTXN2P0C2S0 81 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 RCVRNP35243 200 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 MORN2Q502X0 79 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
NEK9-204ENST00000554258 LCNL1Q6ZST4 164 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 ABHD12Q8N2K0 398 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 RPP25LQ8N5L8 163 aaKnown RBP13.15□□□□□ -0.3
NEK9-204ENST00000554258 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 ZNF439Q8NDP4 499 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 OR52L2PQ8NGH6 319 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 CHPT1Q8WUD6 406 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 CLEC7AQ9BXN2 247 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 SRRQ9GZT4 340 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 OR2S2Q9NQN1 319 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 KLK11Q9UBX7 282 aa13.15□□□□□ -0.3
NEK9-204ENST00000554258 OR2F2O95006 317 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 IGSF11Q5DX21 431 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 COMMD1Q8N668 190 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 GDPD1Q8N9F7 314 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 OR5AP2Q8NGF4 316 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 OR9G1Q8NH87 305 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 SDHCQ99643 169 aaPredicted RBP13.14□□□□□ -0.31
NEK9-204ENST00000554258 IFT46Q9NQC8 304 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 PSG11Q9UQ72 335 aa13.14□□□□□ -0.31
NEK9-204ENST00000554258 IGHV3-43A0A0B4J1X8 118 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 J3QR06 171 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 IGHV3-43DP0DP04 118 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 GP9P14770 177 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 SPNP16150 400 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 ZBTB25P24278 435 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 NFYBP25208 207 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 GNMTQ14749 295 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 LTC4SQ16873 150 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 MINOS1Q5TGZ0 78 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 S100ZQ8WXG8 99 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 NOL4LQ96MY1 436 aaPredicted RBP13.13□□□□□ -0.31
NEK9-204ENST00000554258 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
NEK9-204ENST00000554258 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 GNG12Q9UBI6 72 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 MINOS1-NBL1R4GNA1 71 aa13.13□□□□□ -0.31
NEK9-204ENST00000554258 LANCL1O43813 399 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 RGS11O94810 467 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 CD74P04233 296 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 IGHV4-30-4P0DP06 118 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 PPP1CCP36873 323 aaKnown RBP13.12□□□□□ -0.31
NEK9-204ENST00000554258 ZNF134P52741 427 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 PRRX1P54821 245 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 ACTBP60709 375 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 SLC35B1P78383 322 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 CT45A1Q5HYN5 189 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
NEK9-204ENST00000554258 H1FOOQ8IZA3 346 aaPredicted RBP13.12□□□□□ -0.31
NEK9-204ENST00000554258 TMEM229BQ8NBD8 167 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 CT45A3Q8NHU0 189 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 IL1F10Q8WWZ1 152 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
NEK9-204ENST00000554258 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
NEK9-204ENST00000554258 HERC1Q15751 4861 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 LY6LH3BQJ8 138 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 M0QZK8 103 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 TUSC2O75896 110 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 TBPP20226 339 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 CEACAM6P40199 344 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 TAS2R46P59540 309 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 LSAMPQ13449 338 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 CDK10Q15131 360 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 ZNF660Q6AZW8 331 aaPredicted RBP13.11□□□□□ -0.31
NEK9-204ENST00000554258 DHRS11Q6UWP2 260 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 Q8N402 240 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 OR10V1Q8NGI7 309 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms