RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SYT6Q5T7P8 510 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF691Q5VV52 312 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 RNLSQ5VYX0 342 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 KDM4DQ6B0I6 523 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF497Q6ZNH5 498 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF833PQ6ZTB9 187 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 DHFR2Q86XF0 187 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ENTHD1Q8IYW4 607 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 SAXO1Q8IYX7 474 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 LFNGQ8NES3 379 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 PXT1Q8NFP0 134 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 OR6Q1Q8NGQ2 317 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 HAVCR2Q8TDQ0 301 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CACNG8Q8WXS5 425 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CMTM5Q96DZ9 223 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CLCC1Q96S66 551 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 RASL11BQ9BPW5 248 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 TMED9Q9BVK6 235 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 FAM107BQ9H098 131 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 IFI27L2Q9H2X8 130 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 KCNK15Q9H427 330 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 MOB1AQ9H8S9 216 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 TAS2R4Q9NYW5 299 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CNOT2Q9NZN8 540 aaKnown RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 OR6C3Q9NZP0 311 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CEPT1Q9Y6K0 416 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 A3GALT2U3KPV4 340 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 DNAH8Q96JB1 4490 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 TRAV8-7A0A075B6U6 113 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 A0A0A6YYD4 124 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 IGKV3D-20A0A0C4DH25 116 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 A0A1B0GW64 132 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 MSGN1A6NI15 193 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 SRRM4A7MD48 611 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 E7EUB6 86 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 H0YJW9 148 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 NDUFAB1O14561 156 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 NBR2O15453 112 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 LANCL1O43813 399 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 GATBO75879 557 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 SULT1C4O75897 302 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CA2P00918 260 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 HLA-AP01891 365 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PRH1P02810 166 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 IGKV1-16P04430 117 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 KRT8P05787 483 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR8U9P0C7N5 309 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR2T7P0C7T2 308 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 SAA2P0DJI9 122 aaPredicted RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 APELAP0DMC3 54 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 ANXA8P13928 327 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PPP1CCP36873 323 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 RBM11P57052 281 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 RPS11P62280 158 aaKnown RBP eCLIP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CBX1P83916 185 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PITPNAQ00169 270 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 RAB40BQ12829 278 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 BNIP1Q12981 228 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PSG5Q15238 335 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 DEFB114Q30KQ6 69 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CD200R1LQ6Q8B3 271 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 FAM131AQ6UXB0 335 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 LHFPL3Q86UP9 236 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 Q8IYB0 196 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PARP16Q8N5Y8 322 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 C8orf31Q8N9H6 132 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF565Q8N9K5 539 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR5T1Q8NG75 326 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR10H4Q8NGA5 316 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR10A7Q8NGE5 316 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR52M1Q8NGK5 317 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR9G4Q8NGQ1 327 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 OR10X1Q8NGY0 326 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 MRPL30Q8TCC3 161 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PP6455Q8WZ26 134 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 TMEM106AQ96A25 262 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CREB3L1Q96BA8 519 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 SPSB1Q96BD6 273 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CCDC124Q96CT7 223 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 C10orf35Q96D05 121 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 ASB9Q96DX5 294 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 ABHD14BQ96IU4 210 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 C4orf36Q96KX1 117 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 RDH12Q96NR8 316 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CIB1Q99828 191 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 NEURL2Q9BR09 285 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 CHCHD6Q9BRQ6 235 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 AGMATQ9BSE5 352 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 ST6GALNAC5Q9BVH7 336 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 SCRT1Q9BWW7 348 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 SRD5A3Q9H8P0 318 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 PLEKHA1Q9HB21 404 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 RCC2Q9P258 522 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 GNG8Q9UK08 70 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 STUB1Q9UNE7 303 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 ST3GAL6Q9Y274 331 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 EXOGQ9Y2C4 368 aaKnown RBP2.31□□□□□ -2.04
SLIRP-202ENST00000553981 AMMECR1Q9Y4X0 333 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms