RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
SHMT2-208ENST00000553868 MGAT4CQ9UBM8 478 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 RNF150Q9ULK6 438 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 POLR3KQ9Y2Y1 108 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-208ENST00000553868 KPTNQ9Y664 436 aa11.78□□□□□ -0.52
SHMT2-208ENST00000553868 IGHV2-70DA0A0C4DH43 119 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 F2RP25116 425 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 GNG10P50151 68 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 PRRX1P54821 245 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 LCN2P80188 198 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 FCN2Q15485 313 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 FBLN7Q53RD9 439 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 CT45A1Q5HYN5 189 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 OR13D1Q8NGV5 346 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 CT45A3Q8NHU0 189 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 ASB13Q8WXK3 278 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 LEAP2Q969E1 77 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 ADTRPQ96IZ2 230 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 S1PR3Q99500 378 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 HEXA-AS1Q9H8Q6 139 aa11.77□□□□□ -0.53
SHMT2-208ENST00000553868 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 TNFSF12O43508 249 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 IFNA21P01568 189 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 SERPINE2P07093 398 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 DVL1P1P54792 670 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-208ENST00000553868 FAM53AQ6NSI3 398 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-208ENST00000553868 FAM71F2Q6NXP2 309 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 C1QL4Q86Z23 238 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 LYG1Q8N1E2 194 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 C11orf42Q8N5U0 333 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 OR10X1Q8NGY0 326 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 ABHD14BQ96IU4 210 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 CLEC7AQ9BXN2 247 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 UNKLQ9H9P5 680 aaKnown RBP11.76□□□□□ -0.53
SHMT2-208ENST00000553868 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-208ENST00000553868 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
SHMT2-208ENST00000553868 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-208ENST00000553868 EPPK1P58107 5090 aaKnown RBP11.76□□□□□ -0.53
SHMT2-208ENST00000553868 DSCAML1Q8TD84 2053 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 KIAA2026Q5HYC2 2103 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 J3QR06 171 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 M0R1X1 148 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 GOSR2O14653 212 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 SLC31A2O15432 143 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 HLA-GP17693 338 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 EPHA1P21709 976 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 PRTN3P24158 256 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 UCP1P25874 307 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 ZNF134P52741 427 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 ARF6P62330 175 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 FOXL1Q12952 345 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 TMEM187Q14656 261 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 LRTM2Q8N967 370 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 CD300LFQ8TDQ1 290 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 TCTEX1D2Q8WW35 142 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 TAF15Q92804 592 aaKnown RBP eCLIP11.75□□□□□ -0.53
SHMT2-208ENST00000553868 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 NEURL2Q9BR09 285 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 LPAR2Q9HBW0 351 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 PRELID3BQ9Y3B1 194 aa11.75□□□□□ -0.53
SHMT2-208ENST00000553868 SAA2-SAA4A0A096LPE2 208 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 IGHV2-26A0A0B4J1V2 119 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 DUXBA0A1W2PPF3 345 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 ATG12O94817 140 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 SAA2P0DJI9 122 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-208ENST00000553868 HKR1P10072 659 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 RPA2P15927 270 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 KIR2DS2P43631 304 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 THBS3P49746 956 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 CD83Q01151 205 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 PAX2Q02962 417 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 SP6Q3SY56 376 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 NCR3LG1Q68D85 454 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 ZNF695Q8IW36 515 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 BEND2Q8NDZ0 799 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 OR11H7Q8NGC8 314 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 TP53RKQ96S44 253 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 KRTAP17-1Q9BYP8 105 aa11.74□□□□□ -0.53
SHMT2-208ENST00000553868 A0A1W2PPE3 182 aa11.73□□□□□ -0.53
SHMT2-208ENST00000553868 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
SHMT2-208ENST00000553868 B4DSR2 109 aa11.73□□□□□ -0.53
SHMT2-208ENST00000553868 GIPP09681 153 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-208ENST00000553868 RAP2BP61225 183 aa11.73□□□□□ -0.53
SHMT2-208ENST00000553868 UBA52P62987 128 aaKnown RBP11.73□□□□□ -0.53
SHMT2-208ENST00000553868 TAGLNQ01995 201 aaKnown RBP11.73□□□□□ -0.53
SHMT2-208ENST00000553868 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms