RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PTX4Q96A99 478 aa6.68□□□□□ -1.34
PRKCH-208ENST00000553846 NSL1Q96IY1 281 aa6.68□□□□□ -1.34
PRKCH-208ENST00000553846 C11orf54Q9H0W9 315 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-208ENST00000553846 ERVK13-1Q9NX77 482 aa6.68□□□□□ -1.34
PRKCH-208ENST00000553846 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-208ENST00000553846 TRBV5-5A0A0J9YX44 114 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 PPP5D1E7EU14 171 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 UBE2CO00762 179 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 PRH1P02810 166 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 LIMS3P0CW19 117 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 LIMS4P0CW20 117 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 C8orf88P0DMB2 117 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 MGMTP16455 207 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 CPEP16870 476 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 CALB2P22676 271 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 CAPGP40121 348 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 LGALS7P47929 136 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 APOC4P55056 127 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 RPS11P62280 158 aaKnown RBP eCLIP6.67□□□□□ -1.34
PRKCH-208ENST00000553846 FLOT2Q14254 428 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 GPR176Q14439 515 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 KLK9Q2XQG4 91 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 ODF3L2Q3SX64 289 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 ZNF57Q68EA5 555 aaPredicted RBP6.67□□□□□ -1.34
PRKCH-208ENST00000553846 SPATA24Q86W54 205 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 GPHB5Q86YW7 130 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 TMEM217Q8N7C4 229 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 OR52B4Q8NGK2 314 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 OR13C5Q8NGS8 318 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 MUL1Q969V5 352 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 FAM46BQ96A09 425 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 C5orf30Q96GV9 206 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 CCDC140Q96MF4 163 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
PRKCH-208ENST00000553846 BANF2Q9H503 90 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 COA4Q9NYJ1 87 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 KCNIP1Q9NZI2 227 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 OR1A1Q9P1Q5 309 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 KLK9Q9UKQ9 250 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 POMPQ9Y244 141 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 LRRC42Q9Y546 428 aa6.67□□□□□ -1.34
PRKCH-208ENST00000553846 TRBV5-7A0A0A0MS05 114 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 SCAF4O95104 1147 aaKnown RBP6.66□□□□□ -1.34
PRKCH-208ENST00000553846 OR2C1O95371 312 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 BAG2O95816 211 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 CD2P06729 351 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 APELAP0DMC3 54 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 FCGR2BP31994 310 aaPredicted RBP6.66□□□□□ -1.34
PRKCH-208ENST00000553846 GYS2P54840 703 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 RPS16P62249 146 aaKnown RBP6.66□□□□□ -1.34
PRKCH-208ENST00000553846 PPP3R1P63098 170 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 GLIPR1L1Q6UWM5 242 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 ZNF575Q86XF7 245 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 ZDHHC13Q8IUH4 622 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 FBLIM1Q8WUP2 373 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 THTPAQ9BU02 230 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 SELENOIQ9C0D9 397 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 AASSQ9UDR5 926 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 STEAP1Q9UHE8 339 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
PRKCH-208ENST00000553846 TRBV6-6A0A0A6YYG2 114 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 TRAV25A0A0B4J276 109 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 IGKV1-6A0A0C4DH72 117 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 GNGT1P63211 74 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 PRSS8Q16651 343 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 TMEM177Q53S58 311 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 MEDAGQ5VYS4 303 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 BTNL8Q6UX41 500 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 UXS1Q8NBZ7 420 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 NECAP1Q8NC96 275 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 C2CD4CQ8TF44 421 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 IL1F10Q8WWZ1 152 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 SRSF12Q8WXF0 261 aaKnown RBP6.65□□□□□ -1.34
PRKCH-208ENST00000553846 S100A13Q99584 98 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 MAP6D1Q9H9H5 199 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 MRPS18AQ9NVS2 196 aaKnown RBP6.65□□□□□ -1.34
PRKCH-208ENST00000553846 FBXL7Q9UJT9 491 aa6.65□□□□□ -1.34
PRKCH-208ENST00000553846 OGG1O15527 345 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 GGCTO75223 188 aaKnown RBP6.64□□□□□ -1.35
PRKCH-208ENST00000553846 LALBAP00709 142 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 GBX2P52951 348 aaPredicted RBP6.64□□□□□ -1.35
PRKCH-208ENST00000553846 ATP5G2Q06055 141 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 RBMS2Q15434 407 aaKnown RBP6.64□□□□□ -1.35
PRKCH-208ENST00000553846 C15orf32Q32M92 178 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 ANKRD55Q3KP44 614 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 CCDC58Q4VC31 144 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 UNQ9165/PRO28630Q6UXU0 137 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 C19orf35Q6ZS72 473 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 CDH26Q8IXH8 852 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 OR52I1Q8NGK6 324 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 EDARADDQ8WWZ3 215 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 SMIM19Q96E16 107 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 MRPL48Q96GC5 212 aaKnown RBP6.64□□□□□ -1.35
PRKCH-208ENST00000553846 PGLYRP3Q96LB9 341 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 HARBI1Q96MB7 349 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 MFFQ9GZY8 342 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 IMPAD1Q9NX62 359 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms