RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OR5AN1Q8NGI8 311 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 OR10R2Q8NGX6 335 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
SRP54-203ENST00000553544 YIPF6Q96EC8 236 aa9.17□□□□□ -0.94
SRP54-203ENST00000553544 ZNF107Q9UII5 783 aaPredicted RBP9.17□□□□□ -0.94
SRP54-203ENST00000553544 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 OR5H14A6NHG9 310 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 H0YJW9 148 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 HSPA12AO43301 675 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 DIRAS3O95661 229 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 FCGR3AP08637 254 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 OR8U8P0C7N1 319 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 GNB3P16520 340 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 PSMB8P28062 276 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 MC5RP33032 325 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 TALDO1P37837 337 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 SERPINB10P48595 397 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 SRSF7Q16629 238 aaKnown RBP eCLIP9.16□□□□□ -0.94
SRP54-203ENST00000553544 IDNKQ5T6J7 187 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 FAM131AQ6UXB0 335 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 ADAMTSL5Q6ZMM2 481 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 OR4A4PQ8NGN8 299 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 OR13F1Q8NGS4 319 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 MYOZ3Q8TDC0 251 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 AP3S1Q92572 193 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 ISOC1Q96CN7 298 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 RNF5Q99942 180 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 ATG5Q9H1Y0 275 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 CSMD3Q7Z407 3707 aa9.16□□□□□ -0.94
SRP54-203ENST00000553544 TRBV6-7A0A0A0MS04 114 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 FABP7O15540 132 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 GSTP1P09211 210 aaKnown RBP9.15□□□□□ -0.94
SRP54-203ENST00000553544 HIST1H1DP16402 221 aaKnown RBP9.15□□□□□ -0.94
SRP54-203ENST00000553544 VDAC1P21796 283 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 ARFRP1Q13795 201 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 KIAA0141Q14154 515 aaPredicted RBP9.15□□□□□ -0.94
SRP54-203ENST00000553544 LIN54Q6MZP7 749 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 GLDNQ6ZMI3 551 aaPredicted RBP9.15□□□□□ -0.94
SRP54-203ENST00000553544 LGALS14Q8TCE9 139 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 BCL7BQ9BQE9 202 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 CABLES2Q9BTV7 478 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 FUNDC2Q9BWH2 189 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 OR51J1Q9H342 316 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 DIABLOQ9NR28 239 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 RHBDL2Q9NX52 303 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 RDH8Q9NYR8 311 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 RNF150Q9ULK6 438 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 SPATA2Q9UM82 520 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 GAB2Q9UQC2 676 aa9.15□□□□□ -0.94
SRP54-203ENST00000553544 SMIM30A4D0T7 59 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 G3V318 75 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 RRHO14718 337 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 ATP6V0E1O15342 81 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 RBBP9O75884 186 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 GABARAPO95166 117 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 IGLV1-40P01703 118 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 GSTT2P0CG29 244 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 GSTT2BP0CG30 244 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 SMIM18P0DKX4 95 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 OR5H8P0DN80 308 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 CRIP2P52943 208 aaPredicted RBP9.14□□□□□ -0.95
SRP54-203ENST00000553544 LINC00205P59089 165 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 ZNF616Q08AN1 781 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 C19orf54Q5BKX5 351 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 TMEM65Q6PI78 240 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 Q6ZS49 121 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 ANKRD13BQ86YJ7 626 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 ZNF383Q8NA42 475 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 MINDY2Q8NBR6 621 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 ACOT12Q8WYK0 555 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 UBE2E2Q96LR5 201 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 FBXL15Q9H469 300 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 EDA2RQ9HAV5 297 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 KIAA1456Q9P272 454 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 ZNF221Q9UK13 617 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 WASHC3Q9Y3C0 194 aa9.14□□□□□ -0.95
SRP54-203ENST00000553544 A0A075B6Q4 140 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 IGKV1D-8A0A087WSZ0 117 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 FCN1O00602 326 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 SAP30O75446 220 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 JTBO76095 146 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 GP9P14770 177 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 SPNP16150 400 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 DTYMKP23919 212 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 GNG2P59768 71 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 NDPQ00604 133 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 UBE2NLQ5JXB2 153 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 ZNF660Q6AZW8 331 aaPredicted RBP9.13□□□□□ -0.95
SRP54-203ENST00000553544 MZT2AQ6P582 158 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 DRAXINQ8NBI3 349 aaPredicted RBP9.13□□□□□ -0.95
SRP54-203ENST00000553544 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.13□□□□□ -0.95
SRP54-203ENST00000553544 RAB2BQ8WUD1 216 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 MAFIPQ8WZ33 124 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 S100A16Q96FQ6 103 aaKnown RBP9.13□□□□□ -0.95
SRP54-203ENST00000553544 CMTM3Q96MX0 182 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 DCSTAMPQ9H295 470 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms