RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 FABP9Q0Z7S8 132 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 TAF1AQ15573 450 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-208ENST00000553278 HACD4Q5VWC8 232 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 ALKAL1Q6UXT8 129 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 SH2D6Q7Z4S9 175 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF709Q8N972 641 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 PXT1Q8NFP0 134 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 OR2D3Q8NGH3 330 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 LHFPL5Q8TAF8 219 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF721Q8TF20 911 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 AP3S1Q92572 193 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 PHB2Q99623 299 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 SELENOSQ9BQE4 189 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 ANAPC10Q9UM13 185 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 HHLA2Q9UM44 414 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 SLIT3O75094 1523 aa3.44□□□□□ -1.86
SCFD1-208ENST00000553278 A0A087WUJ7 227 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 IGKV6D-41A0A0C4DH26 115 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 IGHV1-69-2A0A0G2JMI3 117 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 OR4C45A6NMZ5 311 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 CYSRT1A8MQ03 144 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 SLC25A20O43772 301 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 NOS1APO75052 506 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF189O75820 626 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-208ENST00000553278 CRABP1P29762 137 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 RBX1P62877 108 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 HIST1H3AP68431 136 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 H3F3AP84243 136 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 LGALSLQ3ZCW2 172 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-208ENST00000553278 KPRPQ5T749 579 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-208ENST00000553278 S100A7AQ86SG5 101 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 C20orf196Q8IYI0 205 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 ZFAND2AQ8N6M9 145 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 CD200R1Q8TD46 325 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 C12orf43Q96C57 262 aaKnown RBP3.43□□□□□ -1.86
SCFD1-208ENST00000553278 CCL13Q99616 98 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 ULBP3Q9BZM4 244 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 NKX6-2Q9C056 277 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-208ENST00000553278 DCSTAMPQ9H295 470 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 OR5V1Q9UGF6 321 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF835Q9Y2P0 537 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 PRELID3BQ9Y3B1 194 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 U3KQK5 164 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
SCFD1-208ENST00000553278 BHLHE40O14503 412 aa3.42□□□□□ -1.86
SCFD1-208ENST00000553278 LECT2O14960 151 aa3.42□□□□□ -1.86
SCFD1-208ENST00000553278 GZMMP51124 257 aa3.42□□□□□ -1.86
SCFD1-208ENST00000553278 KLF3P57682 345 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-208ENST00000553278 LIN52Q52LA3 116 aa3.42□□□□□ -1.86
SCFD1-208ENST00000553278 BORCS7Q96B45 105 aa3.42□□□□□ -1.86
SCFD1-208ENST00000553278 GNPNAT1Q96EK6 184 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-208ENST00000553278 SIGMAR1Q99720 223 aa3.42□□□□□ -1.86
SCFD1-208ENST00000553278 CMSS1Q9BQ75 279 aaKnown RBP3.42□□□□□ -1.86
SCFD1-208ENST00000553278 NMNAT1Q9HAN9 279 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-208ENST00000553278 OR6C6A6NF89 314 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 OR2B3O76000 313 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 TTRP02766 147 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 CST2P09228 141 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF286BP0CG31 522 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 B2MP61769 119 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 CAV1Q03135 178 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 CDK10Q15131 360 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 PYCR3Q53H96 274 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 HMGN2P46Q86SG4 172 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 ZNF680Q8NEM1 530 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 OR10X1Q8NGY0 326 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 SFRP2Q96HF1 295 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 LINC00167Q96N53 147 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 PPP1R2P1Q96PQ5 205 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 KIFC1Q9BW19 673 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 CXorf21Q9HAI6 301 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 PKIGQ9Y2B9 76 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 ATAD5Q96QE3 1844 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 DCCP43146 1447 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 PRRC2AP48634 2157 aaKnown RBP3.41□□□□□ -1.86
SCFD1-208ENST00000553278 GRIN2BQ13224 1484 aa3.41□□□□□ -1.86
SCFD1-208ENST00000553278 IGLV2-18A0A075B6J9 118 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 CCDC144AA2RUR9 1427 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 K7EM74 188 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 FGF6P10767 208 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 HIST1H1TP22492 207 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-208ENST00000553278 GNG10P50151 68 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 MRPL51Q4U2R6 128 aaKnown RBP3.4□□□□□ -1.87
SCFD1-208ENST00000553278 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 UMODL1-AS1Q8N2C9 162 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 OR2T4Q8NH00 348 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 CNBD2Q96M20 576 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 GPR84Q9NQS5 396 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 AK3Q9UIJ7 227 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF391Q9UJN7 358 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 ANGPT4Q9Y264 503 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 DSCAML1Q8TD84 2053 aa3.4□□□□□ -1.87
SCFD1-208ENST00000553278 EIF3AQ14152 1382 aaKnown RBP3.39□□□□□ -1.87
SCFD1-208ENST00000553278 A8MWP6 167 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 INMT-MINDY4F8WBC2 141 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 COX7A2LO14548 114 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 IGHV3-30-3P0DP02 117 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 DR1Q01658 176 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms