RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SIRPB1O00241 398 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 DEGS1O15121 323 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 MRPS14O60783 128 aaKnown RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CSN2P05814 226 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CGB3P0DN86 165 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CGB7P0DN87 165 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 EPHA2P29317 976 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 BLVRBP30043 206 aaPredicted RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 GNG10P50151 68 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 FUT6P51993 359 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CRIP2P52943 208 aaPredicted RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 FXYD6P3P58550 94 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 SNRPEP62304 92 aaKnown RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 MEDAGQ5VYS4 303 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 C12orf73Q69YU5 71 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 SLC25A24Q6NUK1 477 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF773Q6PK81 442 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 UNQ5815/PRO19632Q6UWF5 114 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 RASSF6Q6ZTQ3 369 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 SLC25A26Q70HW3 274 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 PPP1R27Q86WC6 154 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 SERPINA12Q8IW75 414 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 LINC00311Q8N616 119 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 C8orf31Q8N9H6 132 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 TMEM104Q8NE00 496 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 BPIFB6Q8NFQ5 453 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 OR2T33Q8NG76 320 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 OR8J1Q8NGP2 316 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 OR13A1Q8NGR1 328 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 OR6K6Q8NGW6 343 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 RFESDQ8TAC1 157 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CNIH3Q8TBE1 160 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 FANK1Q8TC84 345 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 APH1BQ8WW43 257 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 TRUB1Q8WWH5 349 aaKnown RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 RTN4IP1Q8WWV3 396 aaPredicted RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 THRSPQ92748 146 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 LEAP2Q969E1 77 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 USMG5Q96IX5 58 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 Q96MT0 163 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 RNF126Q9BV68 326 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 C6orf62Q9GZU0 229 aaPredicted RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 RHOFQ9HBH0 211 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 GPR84Q9NQS5 396 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 GPR173Q9NS66 373 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CLN6Q9NWW5 311 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CALYQ9NYX4 217 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 NDUFA13Q9P0J0 144 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 RCC2Q9P258 522 aaKnown RBP3.81□□□□□ -1.8
CKAP4-203ENST00000553039 CDH10Q9Y6N8 788 aa3.81□□□□□ -1.8
CKAP4-203ENST00000553039 IGHV4-4A0A075B6R2 117 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 MEIKINA0A087WXM9 373 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 TRAV10A0A0B4J240 114 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 SCO2A0A1W2PP80 73 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 IRGMA1A4Y4 181 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF736B4DX44 427 aaPredicted RBP3.8□□□□□ -1.8
CKAP4-203ENST00000553039 FAM90A26D6RGX4 464 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 LOC110117498-PIK3R3F6TDL0 507 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 F8VVB4 439 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 F8VWA3 439 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 H3BUA1 57 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 NBR2O15453 112 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 SOX15O60248 233 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 WBP4O75554 376 aaKnown RBP3.8□□□□□ -1.8
CKAP4-203ENST00000553039 DHRS3O75911 302 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 OR2H2O95918 312 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 IFNGP01579 166 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 HMGN1P05114 100 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 KRT8P05787 483 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF44P15621 663 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 CTRB1P17538 263 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 PRKACAP17612 351 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ATP1B3P54709 279 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ACTBP60709 375 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 SNRPGP62308 76 aaKnown RBP3.8□□□□□ -1.8
CKAP4-203ENST00000553039 CX3CL1P78423 397 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 CDK5Q00535 292 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 GINS1Q14691 196 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 LTC4SQ16873 150 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 C5orf64Q2M2E5 130 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 Q3ZCU0 254 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 LBHQ53QV2 105 aaPredicted RBP3.8□□□□□ -1.8
CKAP4-203ENST00000553039 TMEM236Q5W0B7 351 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF57Q68EA5 555 aaPredicted RBP3.8□□□□□ -1.8
CKAP4-203ENST00000553039 TMEM42Q69YG0 159 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 CTRB2Q6GPI1 263 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 DEGS2Q6QHC5 323 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 Q6ZR54 194 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 AHSA2Q719I0 299 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ERI1Q8IV48 349 aaKnown RBP3.8□□□□□ -1.8
CKAP4-203ENST00000553039 IQCF1Q8N6M8 205 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 NPBQ8NG41 125 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 OR52M1Q8NGK5 317 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 OR13C5Q8NGS8 318 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 OR6N2Q8NGY6 317 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 OR4A5Q8NH83 315 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 RHOXF1Q8NHV9 184 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 OR51E1Q8TCB6 317 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 CASTOR1Q8WTX7 329 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 FCGR1BQ92637 280 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms