RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 RPL13AP3Q6NVV1 102 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 MORN3Q6PF18 240 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 DNM1P34Q6PK57 102 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 TBPL2Q6SJ96 375 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 EPGNQ6UW88 154 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 CYHR1Q6ZMK1 362 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 C16orf47Q6ZP98 133 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 Q6ZS52 159 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 FA2HQ7L5A8 372 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 DHFR2Q86XF0 187 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 ST13P4Q8IZP2 240 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 ZCCHC24Q8N2G6 241 aaKnown RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 STX19Q8N4C7 294 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 C2orf73Q8N5S3 287 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 ZDHHC22Q8N966 263 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 MORN4Q8NDC4 146 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 C1orf64Q8NEQ6 169 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR8G5Q8NG78 346 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR2M7Q8NG81 312 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR8J3Q8NGG0 315 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR8J2Q8NGG1 315 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR4D6Q8NGJ1 314 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR9Q1Q8NGQ5 310 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR5H2Q8NGV7 314 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR51Q1Q8NH59 317 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 ZNF563Q8TA94 476 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 WFDC5Q8TCV5 224 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 HAVCR2Q8TDQ0 301 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 SLC37A2Q8TED4 501 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 PHF10Q8WUB8 498 aaKnown RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 YIPF5Q969M3 257 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 TESCQ96BS2 214 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 KLF6Q99612 283 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 APOL4Q9BPW4 351 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 C20orf144Q9BQM9 153 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 ANAPC13Q9BS18 74 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 RTBDNQ9BSG5 229 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 THTPAQ9BU02 230 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 TAPBPLQ9BX59 468 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 MAP1LC3CQ9BXW4 147 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 SRRQ9GZT4 340 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 OR52A5Q9H2C5 316 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 PARP11Q9NR21 331 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 UBQLN4Q9NRR5 601 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 SCN3BQ9NY72 215 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 EURLQ9NYK6 297 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 TAS2R7Q9NYW3 318 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 STMN3Q9NZ72 180 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 DNAJC27Q9NZQ0 273 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 ANXA10Q9UJ72 324 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 PCTPQ9UKL6 214 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 BOKQ9UMX3 212 aaPredicted RBP1.22□□□□□ -2.21
LIMA1-209ENST00000552008 SLC35A3Q9Y2D2 325 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 LRRC37A2A6NM11 1700 aa1.22□□□□□ -2.21
LIMA1-209ENST00000552008 VWA8A3KMH1 1905 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 MYH8P13535 1937 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 IGKV1-6A0A0C4DH72 117 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 D6RAR5 112 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 G3V2T6 193 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CLDN34H7C241 214 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 UPK2O00526 184 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CCL22O00626 93 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 GPR171O14626 319 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 GMDSO60547 372 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SHOX2O60902 331 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 UGT2B11O75310 529 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CBR3O75828 277 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 KCNK2O95069 426 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF682O95780 498 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PDYNP01213 254 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 IGKV1-39P01597 117 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 APOC1P02654 83 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 IGKV1D-39P04432 117 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 HMGN1P05114 100 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SERPINA7P05543 415 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 GUSBP08236 651 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RPS17P08708 135 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SCGB1C2P0DMR2 95 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 COX4I1P13073 169 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CPMP14384 443 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 NQO1P15559 274 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 IMPA1P29218 277 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SLC6A1P30531 599 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 GABRA3P34903 492 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 MAGEA12P43365 314 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DNASE1L1P49184 302 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RAB38P57729 211 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TAS2R41P59536 307 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RAB8AP61006 207 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PSME3P61289 254 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 UBE2IP63279 158 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ELF3P78545 371 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CCL7P80098 99 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CDK6Q00534 326 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 REEP5Q00765 189 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 FMODQ06828 376 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PLCXD2Q0VAA5 305 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 BAMBIQ13145 260 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 C1DQ13901 141 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 FLOT2Q14254 428 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms