RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ABCA13Q86UQ4 5058 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 RBMXL2O75526 392 aaKnown RBP11.36□□□□□ -0.59
CACNB3-220ENST00000551716 CRTAPO75718 401 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-220ENST00000551716 BAG2O95816 211 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 CRYGBP07316 175 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 FAM106AQ4KMX7 169 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 SIGIRRQ6IA17 410 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 RPL22L1Q6P5R6 122 aaKnown RBP11.36□□□□□ -0.59
CACNB3-220ENST00000551716 ZNF383Q8NA42 475 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 DRAXINQ8NBI3 349 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-220ENST00000551716 C11orf45Q8TAV5 145 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 FBLIM1Q8WUP2 373 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 MUL1Q969V5 352 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 Q96M66 194 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 C11orf54Q9H0W9 315 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-220ENST00000551716 BANF2Q9H503 90 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 ERVK13-1Q9NX77 482 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 FBXL7Q9UJT9 491 aa11.36□□□□□ -0.59
CACNB3-220ENST00000551716 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 MPPED1O15442 326 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 ZBTB25P24278 435 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 CEACAM6P40199 344 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
CACNB3-220ENST00000551716 AWAT2Q6E213 333 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 OR4A47Q6IF82 309 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
CACNB3-220ENST00000551716 JAGN1Q8N5M9 183 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 OR1L6Q8NGR2 347 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 KCNG3Q8TAE7 436 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 PTX4Q96A99 478 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 NEDD4LQ96PU5 975 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
CACNB3-220ENST00000551716 SCAF4O95104 1147 aaKnown RBP11.34□□□□□ -0.59
CACNB3-220ENST00000551716 OR2C1O95371 312 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 IGLV2-23P01705 113 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 IGFBP3P17936 291 aaPredicted RBP11.34□□□□□ -0.59
CACNB3-220ENST00000551716 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
CACNB3-220ENST00000551716 CBX3Q13185 183 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 OR2C3Q8N628 320 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 GVQW1Q8N7I0 195 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 UXS1Q8NBZ7 420 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 SLC35D1Q9NTN3 355 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 POMPQ9Y244 141 aa11.34□□□□□ -0.59
CACNB3-220ENST00000551716 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 PROP1O75360 226 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 APELAP0DMC3 54 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 MED22Q15528 200 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 SLC25A42Q86VD7 318 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
CACNB3-220ENST00000551716 MARC2Q969Z3 335 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 RIMS4Q9H426 269 aaPredicted RBP11.33□□□□□ -0.6
CACNB3-220ENST00000551716 ZNF446Q9NWS9 450 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 FBXL17Q9UF56 701 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 MLXQ9UH92 298 aa11.33□□□□□ -0.6
CACNB3-220ENST00000551716 A8MWP6 167 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 PPP5D1E7EU14 171 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 XRCC3O43542 346 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 GYS2P54840 703 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 C15orf32Q32M92 178 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 ZNF880Q6PDB4 577 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 SVOPQ8N4V2 548 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 Q96MT0 163 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 CHMP1AQ9HD42 196 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-220ENST00000551716 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 MGAT4AQ9UM21 535 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 DMRT1Q9Y5R6 373 aa11.32□□□□□ -0.6
CACNB3-220ENST00000551716 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 PRSS29PA6NIE9 313 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 SHOXO15266 292 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 FCGR1AP12314 374 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 EDN2P20800 178 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 NANOS2P60321 138 aaKnown RBP11.31□□□□□ -0.6
CACNB3-220ENST00000551716 DNAL1Q4LDG9 190 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 TTC9CQ8N5M4 171 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 SETD6Q8TBK2 473 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 CACNG8Q8WXS5 425 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-220ENST00000551716 FAAP24Q9BTP7 215 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 C6orf62Q9GZU0 229 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-220ENST00000551716 ORC6Q9Y5N6 252 aa11.31□□□□□ -0.6
CACNB3-220ENST00000551716 TMEM213A2RRL7 107 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 M0R1X1 148 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 GYG2O15488 501 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 CREBL2O60519 120 aaPredicted RBP11.3□□□□□ -0.6
CACNB3-220ENST00000551716 ACTL6BO94805 426 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 NAPSAO96009 420 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 HLA-AP01891 365 aaKnown RBP11.3□□□□□ -0.6
CACNB3-220ENST00000551716 PRH1P02810 166 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 SCTP09683 121 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 RRASP10301 218 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 CTRB1P17538 263 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 LINC00205P59089 165 aa11.3□□□□□ -0.6
CACNB3-220ENST00000551716 TNXAQ16473 311 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms