RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ASCL4Q6XD76 172 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF600Q6ZNG1 722 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 RASSF6Q6ZTQ3 369 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 CCDC121Q6ZUS5 278 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 SSX6Q7RTT6 188 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 PRSS48Q7RTY5 328 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 SLC36A1Q7Z2H8 476 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 GTSCR1Q86UQ5 136 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 TMEM17Q86X19 198 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ANGPTL5Q86XS5 388 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 GAPTQ8N292 157 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF561Q8N587 486 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 TPRX1Q8N7U7 411 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF485Q8NCK3 441 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF439Q8NDP4 499 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 SDR9C7Q8NEX9 313 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 BBS1Q8NFJ9 593 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 OR4M1Q8NGD0 313 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 OR5A2Q8NGI9 324 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 OR51L1Q8NGJ5 315 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 OR51G2Q8NGK0 314 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 OR11L1Q8NGX0 322 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF671Q8TAW3 534 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 CNIH3Q8TBE1 160 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 VN1R17PQ8TDU5 208 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 REEP6Q96HR9 211 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ERMAPQ96PL5 475 aaPredicted RBP1.73□□□□□ -2.13
CPSF6-207ENST00000551516 OR5M11Q96RB7 305 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 PITX2Q99697 317 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 NIPSNAP1Q9BPW8 284 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 HSPB9Q9BQS6 159 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ABCG5Q9H222 651 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 RGCCQ9H4X1 137 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF286AQ9HBT8 521 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 RAB18Q9NP72 206 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 EHFQ9NZC4 300 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 ONECUT1Q9UBC0 465 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 NUFIP1Q9UHK0 495 aaKnown RBP1.73□□□□□ -2.13
CPSF6-207ENST00000551516 MRM2Q9UI43 246 aaKnown RBP1.73□□□□□ -2.13
CPSF6-207ENST00000551516 KLK9Q9UKQ9 250 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 CDH10Q9Y6N8 788 aa1.73□□□□□ -2.13
CPSF6-207ENST00000551516 DSCAML1Q8TD84 2053 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1B0GU03 582 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TCRBV4S1A1TA0A5B7 111 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 FAM183AA6NL82 134 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TRIM64CA6NLI5 447 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 DHRS7CA6NNS2 312 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 BBIP1A8MTZ0 92 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 J3QT63 122 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 K7EQM0 130 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 DLGAP1O14490 977 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 MRASO14807 208 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 MAGEB4O15481 346 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 FGF16O43320 207 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RAMP3O60896 148 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF253O75346 499 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 IGLV1-51P01701 117 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 IFNW1P05000 195 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 PGAM2P15259 253 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 COX7A1P24310 79 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 NAA10P41227 235 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 OR3A4PP47883 348 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 CX3CR1P49238 355 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 GPM6AP51674 278 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 GBX2P52951 348 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RND3P61587 244 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 NCALDP61601 193 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ACTA2P62736 377 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 GRB2P62993 217 aaKnown RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 GNG3P63215 75 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ACTG2P63267 376 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ACTC1P68032 377 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ACTA1P68133 377 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 CBX1P83916 185 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 PJVKQ0ZLH3 352 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 GK3PQ14409 553 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 DEFB136Q30KP8 78 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ABCA11PQ4W5N1 156 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 LRRC10Q5BKY1 277 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 DEFB121Q5J5C9 76 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RSBN1Q5VWQ0 802 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 MRPL21Q7Z2W9 205 aaKnown RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 STPG2Q8N412 459 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 LINC00311Q8N616 119 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 C8orf31Q8N9H6 132 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 OR2T27Q8NH04 317 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TRMT10AQ8TBZ6 339 aaKnown RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RPS4Y2Q8TD47 263 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 SPRYD4Q8WW59 207 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TRUB1Q8WWH5 349 aaKnown RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TMEM106AQ96A25 262 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RCN3Q96D15 328 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RNF170Q96K19 258 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ATP6V1G3Q96LB4 118 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF251Q9BRH9 671 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 PKIBQ9C010 78 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TMEM133Q9H2Q1 129 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 CLEC5AQ9NY25 188 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 USE1Q9NZ43 259 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 DPM3Q9P2X0 92 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms