RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
CACNB3-216ENST00000550391 F2RP25116 425 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 HTR1DP28221 377 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 CATR1Q13166 79 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 CBX3Q13185 183 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 OR52B4Q8NGK2 314 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 OR4P4Q8NGL7 312 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 OR51H1Q8NH63 302 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 GALNT14Q96FL9 552 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 ADTRPQ96IZ2 230 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
CACNB3-216ENST00000550391 TLN2Q9Y4G6 2542 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 hCG_2014768A0A024R1R8 64 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 LEUTXA8MZ59 168 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 H0Y980 276 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 DUS4LO95620 317 aaKnown RBP11.44□□□□□ -0.58
CACNB3-216ENST00000550391 OR5AC1P0C628 307 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 DUTP33316 252 aaKnown RBP11.44□□□□□ -0.58
CACNB3-216ENST00000550391 CEACAM3P40198 252 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 THBS3P49746 956 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 LGALS4P56470 323 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 MINOS1Q5TGZ0 78 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 PDZD9Q8IXQ8 264 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 TCTEX1D1Q8N7M0 179 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 CASTOR1Q8WTX7 329 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 TCTEX1D2Q8WW35 142 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 LIN7CQ9NUP9 197 aaKnown RBP11.44□□□□□ -0.58
CACNB3-216ENST00000550391 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 TBL2Q9Y4P3 447 aaKnown RBP11.44□□□□□ -0.58
CACNB3-216ENST00000550391 MINOS1-NBL1R4GNA1 71 aa11.44□□□□□ -0.58
CACNB3-216ENST00000550391 A0A0B4J2A0 478 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 CENPVL3A0A0U1RRI6 287 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 A0A1W2PRD5 423 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 A0A1W2PRF3 423 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 A0A1W2PRM7 423 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 VGLL3A8MV65 326 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 CRLF1O75462 422 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 AVPP01185 164 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 GAPDHP04406 335 aaKnown RBP11.43□□□□□ -0.58
CACNB3-216ENST00000550391 EPHA1P21709 976 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 RPL30P62888 115 aaKnown RBP11.43□□□□□ -0.58
CACNB3-216ENST00000550391 SP6Q3SY56 376 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 MIDNQ504T8 468 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 TGIF2LXQ8IUE1 241 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
CACNB3-216ENST00000550391 DRAXINQ8NBI3 349 aaPredicted RBP11.43□□□□□ -0.58
CACNB3-216ENST00000550391 COQ8AQ8NI60 647 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 MITD1Q8WV92 249 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 RPEQ96AT9 228 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 TP53RKQ96S44 253 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 PHB2Q99623 299 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 SHPKQ9UHJ6 478 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 PRELID3BQ9Y3B1 194 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 ANK2Q01484 3957 aa11.43□□□□□ -0.58
CACNB3-216ENST00000550391 ANK3Q12955 4377 aaKnown RBP11.42□□□□□ -0.58
CACNB3-216ENST00000550391 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 LINC00473A8K010 186 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 NPFFO15130 113 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 TXNL1O43396 289 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 SSNA1O43805 119 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 SERPINE2P07093 398 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 CT45A6P0DMU7 189 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 CT45A5P0DMU8 189 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 CT45A7P0DMV0 189 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 KIR2DS2P43631 304 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 REG1BP48304 166 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 SRPXP78539 464 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 ZNF816Q0VGE8 651 aaPredicted RBP11.42□□□□□ -0.58
CACNB3-216ENST00000550391 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 TMEM187Q14656 261 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 ANKRD55Q3KP44 614 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 TPTE2P1Q5T6R2 138 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 GPR157Q5UAW9 335 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 GLYATL2Q8WU03 294 aa11.42□□□□□ -0.58
CACNB3-216ENST00000550391 MRPL20Q9BYC9 149 aaKnown RBP11.42□□□□□ -0.58
CACNB3-216ENST00000550391 FAM212BQ9NTI7 297 aaPredicted RBP11.42□□□□□ -0.58
CACNB3-216ENST00000550391 TRAV40A0A0B4J280 105 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 UCP1P25874 307 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 LINC00205P59089 165 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 TAGLNQ01995 201 aaKnown RBP11.41□□□□□ -0.58
CACNB3-216ENST00000550391 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 LHFPL4Q7Z7J7 247 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 SPAG16Q8N0X2 631 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 CADM3Q8N126 398 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 LGI3Q8N145 548 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 ZNF383Q8NA42 475 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 UXS1Q8NBZ7 420 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 DDB2Q92466 427 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms