RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TSNAXQ99598 290 aaKnown RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 TM2D3Q9BRN9 247 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 AGMATQ9BSE5 352 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 CHMP1AQ9HD42 196 aaPredicted RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 PLCXD1Q9NUJ7 323 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 PLEKHJ1Q9NW61 149 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 METTL1Q9UBP6 276 aaKnown RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 NKX1-2Q9UD57 310 aaPredicted RBP5.86□□□□□ -1.47
NEK3-201ENST00000550331 A3GALT2U3KPV4 340 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 RYR1P21817 5038 aa5.86□□□□□ -1.47
NEK3-201ENST00000550331 TRIM64CA6NLI5 447 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 A8MZ25 164 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 H3BUA1 57 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 EBAG9O00559 213 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 HSPA12AO43301 675 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 CA2P00918 260 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 IGLV1-51P01701 117 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 GNAO1P09471 354 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 CPEP16870 476 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 ZP3P21754 424 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 TPPP2P59282 170 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 HLA-DRB3P79483 266 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 QRFPP83859 136 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 INSL4Q14641 139 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 PSG5Q15238 335 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 MOGAT2Q3SYC2 334 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 HSD17B12Q53GQ0 312 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 ADAMTSL5Q6ZMM2 481 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 PDPNQ86YL7 162 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 FAM89BQ8N5H3 189 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 LFNGQ8NES3 379 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 SETD6Q8TBK2 473 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 ABHD14BQ96IU4 210 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 MS4A10Q96PG2 267 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 NICN1Q9BSH3 213 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 FAM103A1Q9BTL3 118 aaKnown RBP5.85□□□□□ -1.47
NEK3-201ENST00000550331 URM1Q9BTM9 101 aaKnown RBP5.85□□□□□ -1.47
NEK3-201ENST00000550331 ELOVL1Q9BW60 279 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 MND1Q9BWT6 205 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 PARP12Q9H0J9 701 aaKnown RBP5.85□□□□□ -1.47
NEK3-201ENST00000550331 C11orf54Q9H0W9 315 aaPredicted RBP5.85□□□□□ -1.47
NEK3-201ENST00000550331 LPAR5Q9H1C0 372 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 C12orf4Q9NQ89 552 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 FKBP14Q9NWM8 211 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 HSF4Q9ULV5 492 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 STUB1Q9UNE7 303 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 GAB2Q9UQC2 676 aa5.85□□□□□ -1.47
NEK3-201ENST00000550331 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 A0A0A6YYD4 124 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 A0A0G2JLM5 398 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 LDLRAD4O15165 306 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 PROP1O75360 226 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 BRI3O95415 125 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 IGHV3-11P01762 117 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 APOA2P02652 100 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 TRGV3P03979 118 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 IGKV1-16P04430 117 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 CDK1P06493 297 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 UCHL1P09936 223 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 IGHV4-30-4P0DP06 118 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 SRMP19623 302 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 RAB6AP20340 208 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 CEACAM6P40199 344 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 FXYD3Q14802 87 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 SRSF7Q16629 238 aaKnown RBP eCLIP5.84□□□□□ -1.47
NEK3-201ENST00000550331 CEACAM19Q7Z692 300 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 ANKRD13BQ86YJ7 626 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 Q8N1Y9 231 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 ZNF383Q8NA42 475 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 POC5Q8NA72 575 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.84□□□□□ -1.47
NEK3-201ENST00000550331 BPIFB6Q8NFQ5 453 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 TMEM68Q96MH6 324 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 CLCC1Q96S66 551 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 TMED9Q9BVK6 235 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 KCNK15Q9H427 330 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 RANGRFQ9HD47 186 aaPredicted RBP5.84□□□□□ -1.47
NEK3-201ENST00000550331 Q9N2K0 584 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 C19orf73Q9NVV2 129 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 OR1A1Q9P1Q5 309 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 AK3Q9UIJ7 227 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 ZNF221Q9UK13 617 aa5.84□□□□□ -1.47
NEK3-201ENST00000550331 KIAA2026Q5HYC2 2103 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 C13orf42A0A1B0GVH6 325 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 FOXI3A8MTJ6 420 aaPredicted RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 SLC17A2O00624 439 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 CASQ2O14958 399 aaPredicted RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 SOCS1O15524 211 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 SLC25A17O43808 307 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 SCTP09683 121 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 ARSBP15848 533 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 RANBP1P43487 201 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 SERPINB10P48595 397 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 SSBP2P81877 361 aaPredicted RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 SPHARQ15513 63 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 OGFRL1Q5TC84 451 aaPredicted RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 SGPP2Q8IWX5 399 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 DRAXINQ8NBI3 349 aaPredicted RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 OR9G4Q8NGQ1 327 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms