RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 RAB3DO95716 219 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 ZNF735P0CB33 412 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 PPP1CCP36873 323 aaKnown RBP10.66□□□□□ -0.7
NUP188-211ENST00000550219 CEACAM6P40199 344 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 GNG10P50151 68 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 PRRX1P54821 245 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 IFITM3Q01628 133 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 MEF2DQ14814 521 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 RNASE10Q5GAN6 216 aaKnown RBP10.66□□□□□ -0.7
NUP188-211ENST00000550219 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 OR4D10Q8NGI6 311 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 OR10V1Q8NGI7 309 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 LEAP2Q969E1 77 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 RPEQ96AT9 228 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 CREB3L1Q96BA8 519 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 RBM14Q96PK6 669 aaKnown RBP10.66□□□□□ -0.7
NUP188-211ENST00000550219 TINAGL1Q9GZM7 467 aaPredicted RBP10.66□□□□□ -0.7
NUP188-211ENST00000550219 HRASLSQ9HDD0 168 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 RDH8Q9NYR8 311 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 EHFQ9NZC4 300 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 PSG11Q9UQ72 335 aa10.66□□□□□ -0.7
NUP188-211ENST00000550219 TSSC4Q9Y5U2 329 aaPredicted RBP10.66□□□□□ -0.7
NUP188-211ENST00000550219 M0QYG6 137 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 PLA2G10O15496 165 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 HSPA12AO43301 675 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 ZNF134P52741 427 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 HES1Q14469 280 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 CT45A1Q5HYN5 189 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 ZNF57Q68EA5 555 aaPredicted RBP10.65□□□□□ -0.7
NUP188-211ENST00000550219 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 SLC25A48Q6ZT89 311 aaKnown RBP10.65□□□□□ -0.7
NUP188-211ENST00000550219 ARRDC1Q8N5I2 433 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 OR4C16Q8NGL9 310 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 OR56B4Q8NH76 319 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 OR9G1Q8NH87 305 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 CT45A3Q8NHU0 189 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 BORCS5Q969J3 196 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 C7orf50Q9BRJ6 194 aaKnown RBP10.65□□□□□ -0.7
NUP188-211ENST00000550219 GINS4Q9BRT9 223 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 AGMATQ9BSE5 352 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 PARP12Q9H0J9 701 aaKnown RBP10.65□□□□□ -0.7
NUP188-211ENST00000550219 C11orf54Q9H0W9 315 aaPredicted RBP10.65□□□□□ -0.7
NUP188-211ENST00000550219 SLC2A8Q9NY64 477 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 MOB4Q9Y3A3 225 aa10.65□□□□□ -0.7
NUP188-211ENST00000550219 AMMECR1Q9Y4X0 333 aaPredicted RBP10.65□□□□□ -0.7
NUP188-211ENST00000550219 J3QR06 171 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 SLC31A2O15432 143 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 AMY1AP04745 511 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 AMY2AP04746 511 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 SNRNP70P08621 437 aaKnown RBP10.64□□□□□ -0.71
NUP188-211ENST00000550219 NFYAP23511 347 aaPredicted RBP10.64□□□□□ -0.71
NUP188-211ENST00000550219 FCGR2CP31995 323 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 FAUP35544 74 aaKnown RBP10.64□□□□□ -0.71
NUP188-211ENST00000550219 LHFPL1Q86WI0 220 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 OR6F1Q8NGZ6 308 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 EDARADDQ8WWZ3 215 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 OR2W1Q9Y3N9 320 aa10.64□□□□□ -0.71
NUP188-211ENST00000550219 OOSP1A8MZH6 123 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 PPYP01298 95 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 IFNA6P05013 189 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 FAM106CPP0CH98 169 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 AADACP22760 399 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 INPP1P49441 399 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 RAB7AP51149 207 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 ZNF137PP52743 207 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 AADACL3Q5VUY0 350 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 FAAP20Q6NZ36 180 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 TMEM17Q86X19 198 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 DRAM1Q8N682 238 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 MOB3AQ96BX8 217 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 ZNF2Q9BSG1 426 aaPredicted RBP10.63□□□□□ -0.71
NUP188-211ENST00000550219 ABHD14AQ9BUJ0 271 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 IFI27L2Q9H2X8 130 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 PALMDQ9NP74 551 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 TBC1D24Q9ULP9 559 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
NUP188-211ENST00000550219 IGKV1D-13A0A0B4J2D9 117 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 A0A1W2PPE3 182 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 PSMB11A5LHX3 300 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 NAP1L6A6NFF2 107 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 DISC1C4P0D8 188 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 LY6LH3BQJ8 138 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 M0QZK8 103 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 IGKV1-13P0DP09 117 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 TMEM11P17152 192 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 LUMP51884 338 aaPredicted RBP10.62□□□□□ -0.71
NUP188-211ENST00000550219 UCP3P55916 312 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 TSPAN5P62079 268 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 ASAH1Q13510 395 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 DIAPH2-AS1Q14236 149 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 HNF4GQ14541 408 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 ODF3L1Q8IXM7 274 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 TERB2Q8NHR7 220 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 PRRT1Q99946 306 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
NUP188-211ENST00000550219 A0A1W2PPI3 338 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 OR5H14A6NHG9 310 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms