RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 RTL8BQ17RB0 113 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 KPRPQ5T749 579 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 ETV3LQ6ZN32 361 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 C8orf86Q6ZUL3 223 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 SAMD12Q8N8I0 201 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 SLC25A46Q96AG3 418 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 FLYWCH2Q96CP2 140 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 C5orf30Q96GV9 206 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 ADTRPQ96IZ2 230 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 AUNIPQ9H7T9 357 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 METTL1Q9UBP6 276 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 TRAV41A0A0B4J266 112 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 LUMP51884 338 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 ARPC4P59998 168 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 NDPQ00604 133 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 PSG5Q15238 335 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 ZNF660Q6AZW8 331 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 LCNL1Q6ZST4 164 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 WFDC9Q8NEX5 89 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 ABHD5Q8WTS1 349 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 OR2W1Q9Y3N9 320 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 WSB1Q9Y6I7 421 aa13.5□□□□□ -0.25
CHMP1A-208ENST00000550102 G3V318 75 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 XRCC3O43542 346 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 SLC25A17O43808 307 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 RRASP10301 218 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 NFYAP23511 347 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 PSMB8P28062 276 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 CBX5P45973 191 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 CRIP2P52943 208 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 CX3CL1P78423 397 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 ECSCRQ19T08 205 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 OXLD1Q5BKU9 147 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 C18orf65Q6ZTR6 163 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 ZNF645Q8N7E2 425 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 S100A16Q96FQ6 103 aaKnown RBP13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 HARBI1Q96MB7 349 aa13.49□□□□□ -0.25
CHMP1A-208ENST00000550102 SLC22A5O76082 557 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 CDX1P47902 265 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 VBP1P61758 197 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 TMEM69Q5SWH9 247 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 TMEM65Q6PI78 240 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 HOGA1Q86XE5 327 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 MRPL41Q8IXM3 137 aaKnown RBP13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 GVQW1Q8N7I0 195 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 TCTEX1D1Q8N7M0 179 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 MRPS26Q9BYN8 205 aaKnown RBP13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 TPSG1Q9NRR2 321 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 FBXO7Q9Y3I1 522 aa13.48□□□□□ -0.25
CHMP1A-208ENST00000550102 J3QRK9 145 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 FCN1O00602 326 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 GABARAPO95166 117 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 DUS4LO95620 317 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 CA2P00918 260 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 HLA-DQB1P01920 261 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 IGLL1P15814 213 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 PPIFP30405 207 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 DUTP33316 252 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 MYCNOSP40205 109 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 LGALS7P47929 136 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 C19orf54Q5BKX5 351 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 BVESQ8NE79 360 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 C4orf3Q8WVX3 66 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 DDB2Q92466 427 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 CLCC1Q96S66 551 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 IFT46Q9NQC8 304 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 NECAP2Q9NVZ3 263 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 FOXA2Q9Y261 457 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 A3GALT2U3KPV4 340 aa13.47□□□□□ -0.25
CHMP1A-208ENST00000550102 IGKV1D-13A0A0B4J2D9 117 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 LINC00473A8K010 186 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 SHOXO15266 292 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 TUSC2O75896 110 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 IGLV1-40P01703 118 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 IGKV1-13P0DP09 117 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 PTHLHP12272 177 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 TMEM267Q0VDI3 215 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 TMEM177Q53S58 311 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 ZNF562Q6V9R5 426 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 KCTD9Q7L273 389 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 PPP1R27Q86WC6 154 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 MINDY2Q8NBR6 621 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 RAX2Q96IS3 184 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 P2RX4Q99571 388 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 GPR61Q9BZJ8 451 aa13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 RBMX2Q9Y388 322 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-208ENST00000550102 TNCP24821 2201 aa13.45□□□□□ -0.26
CHMP1A-208ENST00000550102 A0A1W2PN81 502 aa13.45□□□□□ -0.26
CHMP1A-208ENST00000550102 CCL24O00175 119 aa13.45□□□□□ -0.26
CHMP1A-208ENST00000550102 CRYZL1O95825 349 aa13.45□□□□□ -0.26
CHMP1A-208ENST00000550102 IGLV2-23P01705 113 aa13.45□□□□□ -0.26
CHMP1A-208ENST00000550102 CHRNA7P36544 502 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms