RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 APOBEC3DQ96AK3 386 aaPredicted RBP9.34□□□□□ -0.91
LINC00661-204ENST00000549354 RCC1LQ96I51 464 aaKnown RBP9.34□□□□□ -0.91
LINC00661-204ENST00000549354 TAAR6Q96RI8 345 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 AHRRA9YTQ3 701 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 TMEM56Q96MV1 263 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 HIST1H2BLQ99880 126 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 TMEM56-RWDD3S4R434 201 aa9.34□□□□□ -0.91
LINC00661-204ENST00000549354 LOC102723971A0A1B0GUV8 181 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 BCL2P10415 239 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 FOSL1P15407 271 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 HIST1H1BP16401 226 aaKnown RBP9.33□□□□□ -0.92
LINC00661-204ENST00000549354 IL2RGP31785 369 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 FAM3BP58499 235 aaPredicted RBP9.33□□□□□ -0.92
LINC00661-204ENST00000549354 PRB3Q04118 309 aaPredicted RBP9.33□□□□□ -0.92
LINC00661-204ENST00000549354 BAXQ07812 192 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 ZNF66Q6ZN08 573 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 C1QL4Q86Z23 238 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 OR51G1Q8NGK1 321 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 OR1L1Q8NH94 360 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 SLC39A9Q9NUM3 307 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 CREBBPQ92793 2442 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 MAP1LC3B2A6NCE7 125 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 BTBD17A6NE02 478 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 J3QW42 95 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 DDTP30046 118 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 UCP3P55916 312 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 SRPXP78539 464 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 FAM58AQ8N1B3 248 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 Q8NFD4 153 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 OR4F5Q8NH21 305 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 OR4F4Q96R69 305 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 PCGF1Q9BSM1 259 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 MAP1LC3BQ9GZQ8 125 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 C11orf1Q9H5F2 150 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 PATZ1Q9HBE1 687 aaKnown RBP9.33□□□□□ -0.92
LINC00661-204ENST00000549354 RNF115Q9Y4L5 304 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 NAV3Q8IVL0 2385 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 ZNF737O75373 536 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 UCP1P25874 307 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 C16orf82Q7Z2V1 217 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 MDP1Q86V88 176 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 ZNF295-AS1Q8N0V1 137 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 NANOS1Q8WY41 292 aaKnown RBP9.33□□□□□ -0.92
LINC00661-204ENST00000549354 OR2D2Q9H210 308 aa9.33□□□□□ -0.92
LINC00661-204ENST00000549354 CLEC18AA5D8T8 446 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 TSTD3H0UI37 97 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 GATCO43716 136 aaKnown RBP9.32□□□□□ -0.92
LINC00661-204ENST00000549354 SYNGR2O43760 224 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 SSTR5P35346 364 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 EDDM3BP56851 147 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 COL10A1Q03692 680 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 CLEC18CQ8NCF0 446 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 OR4X1Q8NH49 305 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 SNIP1Q8TAD8 396 aaKnown RBP9.32□□□□□ -0.92
LINC00661-204ENST00000549354 MISP3Q96FF7 219 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 IGHV3OR15-7A0A075B7D8 119 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 TRAV24A0A0B4J272 114 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 ST8SIA5O15466 376 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 IGHV3-48P01763 117 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 HBE1P02100 147 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 KIR2DL2P43627 348 aaPredicted RBP9.32□□□□□ -0.92
LINC00661-204ENST00000549354 ACSF3Q4G176 576 aaPredicted RBP9.32□□□□□ -0.92
LINC00661-204ENST00000549354 Q6ZT83 130 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 TRIB1Q96RU8 372 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 CENPEQ02224 2701 aa9.32□□□□□ -0.92
LINC00661-204ENST00000549354 XKRY2A2RUG3 117 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 KLK10O43240 276 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 PTBP3O95758 552 aaKnown RBP9.31□□□□□ -0.92
LINC00661-204ENST00000549354 IGKV1D-33P01593 117 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 IGKV1-33P01594 117 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 IGKV1-39P01597 117 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 IGKV1D-39P04432 117 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 COX5AP20674 150 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 IGHV1-2P23083 117 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 IL24Q13007 206 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 SLC35E3Q7Z769 313 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 HAPLN4Q86UW8 402 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 PLSCR4Q9NRQ2 329 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 DKK4Q9UBT3 224 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 A0A1B0GU03 582 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
LINC00661-204ENST00000549354 WNT5AP41221 380 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 SLC35B1P78383 322 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 NCR3LG1Q68D85 454 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 PCSK4Q6UW60 755 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 RBMXL3Q8N7X1 1067 aaKnown RBP9.31□□□□□ -0.92
LINC00661-204ENST00000549354 C9orf106Q8NAJ2 232 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 C1orf162Q8NEQ5 155 aaPredicted RBP9.31□□□□□ -0.92
LINC00661-204ENST00000549354 ATP23Q9Y6H3 246 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 TRAV38-1A0A0B4J264 116 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 DVL1O14640 695 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 NAPSAO96009 420 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 G0S2P27469 103 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 S100GP29377 79 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 GABRA6Q16445 453 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 SAXO1Q8IYX7 474 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms