RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 IGLV1-51P01701 117 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 GALP22466 123 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 UNQ5815/PRO19632Q6UWF5 114 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 C6orf201Q7Z4U5 140 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 MS4A15Q8N5U1 240 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 ABHD5Q8WTS1 349 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 EDARADDQ8WWZ3 215 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 PHYHIPQ92561 330 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 OR51E2Q9H255 320 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 MGAT4AQ9UM21 535 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 SSR3Q9UNL2 185 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 A3GALT2U3KPV4 340 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 DNAH1Q9P2D7 4330 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 LOC100506127A0A0U1RQW1 187 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 H3BUA1 57 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 IGHV3-11P01762 117 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 ZP3P21754 424 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 HTR2CP28335 458 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 TPPP2P59282 170 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 RPS25P62851 125 aaKnown RBP9.87□□□□□ -0.83
PTCH1-218ENST00000548945 PSG5Q15238 335 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 MOGAT2Q3SYC2 334 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 GLT8D1Q68CQ7 371 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 SGPP2Q8IWX5 399 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 Q8N1Y9 231 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 LFNGQ8NES3 379 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 CASTOR1Q8WTX7 329 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 PTX4Q96A99 478 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
PTCH1-218ENST00000548945 TMED9Q9BVK6 235 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 CHMP1AQ9HD42 196 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-218ENST00000548945 RANGRFQ9HD47 186 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-218ENST00000548945 C19orf73Q9NVV2 129 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 PTTG2Q9NZH5 202 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 METTL1Q9UBP6 276 aaKnown RBP9.87□□□□□ -0.83
PTCH1-218ENST00000548945 GAB2Q9UQC2 676 aa9.87□□□□□ -0.83
PTCH1-218ENST00000548945 A0A0G2JLM5 398 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 TRDV1A0A1B0GX56 115 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 TMEM14DPA8MWL7 114 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 BPNT1O95861 308 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 CD37P11049 281 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 ZBTB25P24278 435 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 FGF9P31371 208 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-218ENST00000548945 VEGFCP49767 419 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 VBP1P61758 197 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 NCS1P62166 190 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 LSM3P62310 102 aaKnown RBP9.86□□□□□ -0.83
PTCH1-218ENST00000548945 QRFPP83859 136 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 UNC119Q13432 240 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 SRSF7Q16629 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTCH1-218ENST00000548945 ACSM3Q53FZ2 586 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 OR10K2Q6IF99 312 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 GLDNQ6ZMI3 551 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-218ENST00000548945 LRRTM1Q86UE6 522 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 TMEM203Q969S6 136 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 ABHD14BQ96IU4 210 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 FAM103A1Q9BTL3 118 aaKnown RBP9.86□□□□□ -0.83
PTCH1-218ENST00000548945 PARP12Q9H0J9 701 aaKnown RBP9.86□□□□□ -0.83
PTCH1-218ENST00000548945 PLEKHJ1Q9NW61 149 aa9.86□□□□□ -0.83
PTCH1-218ENST00000548945 BRI3O95415 125 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 CA2P00918 260 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 TRGV3P03979 118 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 CEACAM6P40199 344 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 FABP5Q01469 135 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 PDPNQ86YL7 162 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 POC5Q8NA72 575 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 TMEM68Q96MH6 324 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 MS4A10Q96PG2 267 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 NICN1Q9BSH3 213 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 CENPOQ9BU64 300 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 C11orf54Q9H0W9 315 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-218ENST00000548945 EDA2RQ9HAV5 297 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 TXNL4BQ9NX01 149 aaKnown RBP9.85□□□□□ -0.83
PTCH1-218ENST00000548945 HSF4Q9ULV5 492 aa9.85□□□□□ -0.83
PTCH1-218ENST00000548945 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
PTCH1-218ENST00000548945 C13orf42A0A1B0GVH6 325 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 H0Y980 276 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 PROP1O75360 226 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 APOA2P02652 100 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 SRMP19623 302 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 RPS16P62249 146 aaKnown RBP9.84□□□□□ -0.83
PTCH1-218ENST00000548945 HLA-DRB3P79483 266 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 KLF5Q13887 457 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-218ENST00000548945 FXYD3Q14802 87 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 SPCS2Q15005 226 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 C22orf42Q6IC83 251 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 FAM89BQ8N5H3 189 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-218ENST00000548945 OR6M1Q8NGM8 313 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 SETD6Q8TBK2 473 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 CLCC1Q96S66 551 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 URM1Q9BTM9 101 aaKnown RBP9.84□□□□□ -0.83
PTCH1-218ENST00000548945 DCSTAMPQ9H295 470 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 OR1A1Q9P1Q5 309 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 ZNF221Q9UK13 617 aa9.84□□□□□ -0.83
PTCH1-218ENST00000548945 A0A0A6YYD4 124 aa9.83□□□□□ -0.84
PTCH1-218ENST00000548945 LGALS7P47929 136 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms