RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ZNF573Q86YE8 665 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 OR1L1Q8NH94 360 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 DERL1Q9BUN8 251 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 TRAPPC1Q9Y5R8 145 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 PGPEP1LA6NFU8 196 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 ANKRD30BLA7E2S9 258 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 PMS2P5A8MQ11 134 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 MBP02144 154 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 GCH1P30793 250 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 GNG3P63215 75 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 LCN2P80188 198 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 SRYQ05066 204 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 TRA2AQ13595 282 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC7-228ENST00000548938 LRP11Q86VZ4 500 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 OR2Y1Q8NGV0 311 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 DOCK11Q5JSL3 2073 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 C1QTNF9P0C862 333 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 UBE2G2P60604 165 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF497Q6ZNH5 498 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 TMEM144Q7Z5S9 345 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 ODAMA1E959 279 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 TMEM210A6NLX4 147 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 ZG16O60844 167 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 RAB4AP20338 218 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 CA6P23280 308 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 RPL29P47914 159 aaKnown RBP11.54□□□□□ -0.56
HDAC7-228ENST00000548938 ATP5G3P48201 142 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 GNB1P62873 340 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 SPINK9Q5DT21 86 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 FAM53AQ6NSI3 398 aaPredicted RBP11.54□□□□□ -0.56
HDAC7-228ENST00000548938 BTNL3Q6UXE8 466 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 MOB1BQ7L9L4 216 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 TCF23Q7RTU1 214 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 MED12LQ86YW9 2145 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 POM121L2Q96KW2 1035 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 MS4A10Q96PG2 267 aa11.54□□□□□ -0.56
HDAC7-228ENST00000548938 OR5B21A6NL26 309 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 OR2H2O95918 312 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-228ENST00000548938 CD33P20138 364 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 GFRA1P56159 465 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 Q0VFX4 171 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 CST9LP1Q5W188 147 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 TUSC5Q8IXB3 177 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 OR10P1Q8NGE3 313 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 SVIPQ8NHG7 77 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 C5orf30Q96GV9 206 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 WDYHV1Q96HA8 205 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 PXMP4Q9Y6I8 212 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 USF3Q68DE3 2245 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-228ENST00000548938 RPL30P62888 115 aaKnown RBP11.53□□□□□ -0.56
HDAC7-228ENST00000548938 ATP6V1FQ16864 119 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF808Q8N4W9 903 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 SDSLQ96GA7 329 aa11.53□□□□□ -0.56
HDAC7-228ENST00000548938 CACNA1HO95180 2353 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 LRRC30A6NM36 301 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF705FA8MVS1 300 aaPredicted RBP11.52□□□□□ -0.56
HDAC7-228ENST00000548938 S1PR2O95136 353 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 NDUFB4O95168 129 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 SYNGR4O95473 234 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 P0C879 139 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF705DP0CH99 300 aaPredicted RBP11.52□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF705BP0CI00 300 aaPredicted RBP11.52□□□□□ -0.56
HDAC7-228ENST00000548938 SPATA46Q5T0L3 261 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 DTD1Q8TEA8 209 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 TBX15Q96SF7 602 aa11.52□□□□□ -0.56
HDAC7-228ENST00000548938 IGHV3-64DA0A0J9YX35 117 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 GRIFINA4D1Z8 144 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 J3QT63 122 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 ACP1P24666 158 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 OR10J1P30954 320 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 FOLR3P41439 243 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 NUFIP2Q7Z417 695 aaKnown RBP11.52□□□□□ -0.57
HDAC7-228ENST00000548938 LINC00470Q9BZP3 86 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 PKIBQ9C010 78 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 DOCK7Q96N67 2140 aa11.52□□□□□ -0.57
HDAC7-228ENST00000548938 IGKV3D-15A0A087WSY6 115 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 TRAV38-1A0A0B4J264 116 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 RBFOX2O43251 390 aaKnown RBP eCLIP11.51□□□□□ -0.577e-7■■■■□ 24
HDAC7-228ENST00000548938 ZNF883P0CG24 379 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 ADMP35318 185 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 PCP4P48539 62 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 MSMO1Q15800 293 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 A6NNC1 897 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 OTX2P32243 289 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 WDR86Q86TI4 376 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms