RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 APELAP0DMC3 54 aa15.62■□□□□ 0.09
SSH1-207ENST00000547862 RNF5Q99942 180 aa15.62■□□□□ 0.09
SSH1-207ENST00000547862 OR2D2Q9H210 308 aa15.62■□□□□ 0.09
SSH1-207ENST00000547862 VCXQ9H320 206 aa15.62■□□□□ 0.09
SSH1-207ENST00000547862 RDH8Q9NYR8 311 aa15.62■□□□□ 0.09
SSH1-207ENST00000547862 MGAT4AQ9UM21 535 aa15.62■□□□□ 0.09
SSH1-207ENST00000547862 TENM2Q9NT68 2774 aa15.61■□□□□ 0.09
SSH1-207ENST00000547862 IGKV1-6A0A0C4DH72 117 aa15.61■□□□□ 0.09
SSH1-207ENST00000547862 SLC17A2O00624 439 aa15.61■□□□□ 0.09
SSH1-207ENST00000547862 CD3GP09693 182 aa15.61■□□□□ 0.09
SSH1-207ENST00000547862 SGPP2Q8IWX5 399 aa15.61■□□□□ 0.09
SSH1-207ENST00000547862 BET1O15155 118 aa15.6■□□□□ 0.09
SSH1-207ENST00000547862 IGLV1-51P01701 117 aa15.6■□□□□ 0.09
SSH1-207ENST00000547862 PJVKQ0ZLH3 352 aa15.6■□□□□ 0.09
SSH1-207ENST00000547862 HARBI1Q96MB7 349 aa15.6■□□□□ 0.09
SSH1-207ENST00000547862 RANGRFQ9HD47 186 aaPredicted RBP15.6■□□□□ 0.09
SSH1-207ENST00000547862 SCN3BQ9NY72 215 aa15.6■□□□□ 0.09
SSH1-207ENST00000547862 ADAM30Q9UKF2 790 aa15.6■□□□□ 0.09
SSH1-207ENST00000547862 FOXI3A8MTJ6 420 aaPredicted RBP15.59■□□□□ 0.09
SSH1-207ENST00000547862 TRDCB7Z8K6 153 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 LDLRAD4O15165 306 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 ZP3P21754 424 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 TMEM50BP56557 158 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 MRPS15P82914 257 aaKnown RBP15.59■□□□□ 0.09
SSH1-207ENST00000547862 TMEM91Q6ZNR0 172 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 MAFIPQ8WZ33 124 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 PTX4Q96A99 478 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 TM2D3Q9BRN9 247 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 COA4Q9NYJ1 87 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 HSF4Q9ULV5 492 aa15.59■□□□□ 0.09
SSH1-207ENST00000547862 CASQ2O14958 399 aaPredicted RBP15.58■□□□□ 0.08
SSH1-207ENST00000547862 CALRP27797 417 aaKnown RBP15.58■□□□□ 0.08
SSH1-207ENST00000547862 SYNJ2BPP57105 145 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 SSBP2P81877 361 aaPredicted RBP15.58■□□□□ 0.08
SSH1-207ENST00000547862 PLA2G7Q13093 441 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 CBX3Q13185 183 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 PLAC9Q5JTB6 97 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 HES5Q5TA89 166 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 RNLSQ5VYX0 342 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 Q8N1Y9 231 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 FAM89BQ8N5H3 189 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 ISOC1Q96CN7 298 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 CITED4Q96RK1 184 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 PHB2Q99623 299 aa15.58■□□□□ 0.08
SSH1-207ENST00000547862 A0A075B6Q4 140 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 SHOXO15266 292 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 FABP7O15540 132 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 IGLV2-23P01705 113 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 TRBV12-3P01733 135 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 IGSF11Q5DX21 431 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 OR56B1Q8NGI3 324 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 FAM3DQ96BQ1 224 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 CCDC90BQ9GZT6 254 aa15.57■□□□□ 0.08
SSH1-207ENST00000547862 RBM7Q9Y580 266 aaKnown RBP15.57■□□□□ 0.08
SSH1-207ENST00000547862 A0A0G2JLM5 398 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 TMEM272A0A1B0GTI8 110 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 H3BUA1 57 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 DENRO43583 198 aaKnown RBP15.56■□□□□ 0.08
SSH1-207ENST00000547862 ARL6IP5O75915 188 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 IRF3Q14653 427 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.56■□□□□ 0.08
SSH1-207ENST00000547862 BVESQ8NE79 360 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 OR4A4PQ8NGN8 299 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 OR9G4Q8NGQ1 327 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 C5orf30Q96GV9 206 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 SDHAF2Q9NX18 166 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 RYR2Q92736 4967 aa15.56■□□□□ 0.08
SSH1-207ENST00000547862 CD37P11049 281 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 LGALS7P47929 136 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 C2orf76Q3KRA6 126 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 MOGAT2Q3SYC2 334 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 OR10J5Q8NHC4 309 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 LYSTQ99698 3801 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 TNCP24821 2201 aa15.55■□□□□ 0.08
SSH1-207ENST00000547862 LCE6AA0A183 80 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 ANKRD65E5RJM6 399 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 MPPED1O15442 326 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 FCGR3AP08637 254 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 GSTT2P0CG29 244 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 GSTT2BP0CG30 244 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 SERPINB10P48595 397 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 AQP4P55087 323 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 FABP5Q01469 135 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 TNXAQ16473 311 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 RTL8BQ17RB0 113 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 ADAMTSL5Q6ZMM2 481 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 IDO2Q6ZQW0 420 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 RAB3CQ96E17 227 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 GINS4Q9BRT9 223 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 TINAGL1Q9GZM7 467 aaPredicted RBP15.54■□□□□ 0.08
SSH1-207ENST00000547862 C19orf73Q9NVV2 129 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 PEF1Q9UBV8 284 aaKnown RBP15.54■□□□□ 0.08
SSH1-207ENST00000547862 ZNF230Q9UIE0 474 aaPredicted RBP15.54■□□□□ 0.08
SSH1-207ENST00000547862 SACSQ9NZJ4 4579 aa15.54■□□□□ 0.08
SSH1-207ENST00000547862 RGS10O43665 173 aa15.53■□□□□ 0.08
SSH1-207ENST00000547862 DYRK1AQ13627 763 aa15.53■□□□□ 0.08
SSH1-207ENST00000547862 KLF5Q13887 457 aaPredicted RBP15.53■□□□□ 0.08
SSH1-207ENST00000547862 TRAM1Q15629 374 aa15.53■□□□□ 0.08
SSH1-207ENST00000547862 RPEL1Q2QD12 228 aa15.53■□□□□ 0.08
SSH1-207ENST00000547862 GTSCR1Q86UQ5 136 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms